Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1897 ATGTCGGAAATATTCCATGCTGGTGGAGATGTTGTAAGTAGAAATCTCAAGCGCAAGTTAGAGGAGCCACCAGCCGCGGACCATGACTCAGAGGTGTTACTTTCTTTGAGTCTTGGCCGCAACAACAATAACATGGAAAGTGGCGACTCATCCTCCAATTTCACATTCAAATCCTTGAAAACTGCTGAAAACCAGACGAAGCAAGAACGCTTGTTTCCTTGCAAGTTTTGCAACAAGAAATTCGCCAGCTCTCAAGCTTTAGGCGGACATCAAAATGCTCATAAGCGCGAGAGAGTCCTCTCTAAAATGGACAAAATGTTTAACAGGGGAACATTTGCGCTTGATGCTAGTCATCAATTATGTGCATACCCAACAACCATGACAAATTATCTACCTTACCGTGGCTCAAACTCAATACCTCTTTATCAAGGTGCACATATGCACCACCACATACTTCATATGCCTTGCACCATGCCTGGTTTTCGTTTAGGATCATCTAGCTACGGAAACCAAGGCTTACACAACATTCCTCTGAATTCTCGCCACCACGGCCACCACCCAGATGCTGGATTTGGTTTTGGAGTTACTCAACTTCCTTCATCTAGAGAAGTTGCGGGTGATAGAAGTTCTATGATTCATGCTAATCTCGGTAGCCTTCTTAGAAATAACTAA 672 0.4375 MSEIFHAGGDVVSRNLKRKLEEPPAADHDSEVLLSLSLGRNNNNMESGDSSSNFTFKSLKTAENQTKQERLFPCKFCNKKFASSQALGGHQNAHKRERVLSKMDKMFNRGTFALDASHQLCAYPTTMTNYLPYRGSNSIPLYQGAHMHHHILHMPCTMPGFRLGSSSYGNQGLHNIPLNSRHHGHHPDAGFGFGVTQLPSSREVAGDRSSMIHANLGSLLRNN* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1897 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Ahy18g1897 223 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 186 - -
Ahy18g1897 223 Gene3D Classic Zinc Finger 45 118 - -
Ahy18g1897 223 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Ahy18g1897 223 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Ahy18g1897 223 Pfam C2H2-type zinc finger 72 96 - -
Ahy18g1897 223 PANTHER ZINC FINGER PROTEIN JAGGED 1 186 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1897 Ahy-Chr18 93491508 93492179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1897 70 138 C2H2 Transcription Factor Family AT5G14010 46.479 1.81e-12 61.6