Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1844 ATGGTTGAACCCCTAGGCTATGATATGTCTGTTGTTGCAGAGATTTTATCAAACCACCCTCAAAACATATCCGGCGATGTCATTGTCAACGGTGAGAAGTCGAACAAGGCCATGCAACTATCGAATGTTACTGAGGTTAGAAGTGAAGAGATTGAGCTTGGTGATGAGTTACCAGATCATGGATGCCTACAAGAACACGAGATACTAAGAGTTGGAATGCGGTTTGTACAATTATGGATGACTCATGACTTTTATGTTACCTATGCAAAGAAAGTAGGATTTGCAACTAAGATAAGGATGACAACATATGACAATATCACAAAGGCTCCCCTTAACCAAGCTATACACTGTAATCGCGACGGGTACCACGGGTCTTGTGTCAAAGCACCAATGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACATGCAAGACTGGGTTTTGTTCAAGGTTGACTTGATGCACTCACACCCCTGTTCAGCGAGAAAGGTAGTGCACTACCATGAGTATAGGCAACTGACCATACATGCGAAGTGCGTGATCGAGGATAATGATGAGGCTGGGATTCAACCAAATAAGACATTCCTTGCTTTGGCAAATGAGGCTGGAGGCCCCTCTAACTTGGGATTCTCAGAGAAGGATTTAAGAAATTATATAACATTGGATGAGGAGTGTAAATTTAAGAGTGCAGTATGGGTGGATGCAAGATGTAGGGCGTCATATGAATATTATGGAGATGTTGTGTCAGTTGATAGCACCTACAGTACAAACAGGCATGGATTACCGTTTGTGTCGTTCATTGGGATCAACCACCATGGTAACTCAACCCTCCTCAGTTGTGCTTTGCTGGGGAATGAGAAAATCCCAAGTTATGAGTGGCGTATCATAACCGATCAACGTCGGTCCATTCTCCGTGCGATCAAAAATACATTACCCGACACACGCCACCGCTGGTGCATCTGGCATATTACGAAGAAGTTACTGAGCAAGCTTGGGGGTTACCGCCGGTACAGAGATTTGTATGATGACCTCAATGATATTATGTGGAACTCTCGAACTGAGGAGTCATTTGAGGATTACTTATCAGAATTTATGGATGAGTACAAGTTACATAACAACACATGGCTGTCAAGTCTGTTAGTGTTTGATTAA 1182 0.4298 MVEPLGYDMSVVAEILSNHPQNISGDVIVNGEKSNKAMQLSNVTEVRSEEIELGDELPDHGCLQEHEILRVGMRFVQLWMTHDFYVTYAKKVGFATKIRMTTYDNITKAPLNQAIHCNRDGYHGSCVKAPMRKNTISAAGCKARIYVKFDKDMQDWVLFKVDLMHSHPCSARKVVHYHEYRQLTIHAKCVIEDNDEAGIQPNKTFLALANEAGGPSNLGFSEKDLRNYITLDEECKFKSAVWVDARCRASYEYYGDVVSVDSTYSTNRHGLPFVSFIGINHHGNSTLLSCALLGNEKIPSYEWRIITDQRRSILRAIKNTLPDTRHRWCIWHITKKLLSKLGGYRRYRDLYDDLNDIMWNSRTEESFEDYLSEFMDEYKLHNNTWLSSLLVFD* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1844 393 PANTHER OS03G0843700 PROTEIN 51 389 - -
Ahy18g1844 393 Pfam FAR1 DNA-binding domain 83 169 IPR004330 -
Ahy18g1844 393 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 389 IPR031052 GO:0006355
Ahy18g1844 393 Pfam MULE transposase domain 257 303 IPR018289 -
Ahy18g1844 393 Pfam MULE transposase domain 305 336 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1844 Ahy-Chr18 80558192 80562176 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1844 FAR1 1.50E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1844 - - ahf:112733025 592.038