Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1805 ATGAAGGAGGGTGGTGGTCGGAAGCAAGGTGCAATGTCGCCGTGTGCGGCATGCAAGCTTCTCCGGCGGCGATGCGCAAAGGATTGCGTGTTTGCACCGTATTTCCCGGCTGATGAGCCCCAGAAATTTGGGAGTGTCCACAAGGTTTTTGGTGCTAGCAATGTCAACAAGATGTTACAGGAACTACCAGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTGTATGAGGCAAATGCAAGAGTAAGAGACCCTGTGTATGGATGTGTGGGTGCAATATCTTCTCTTCAGCAACAAGTTGATGTTCTCCGAACCCAATTGGCTCTTGCACAAGCCGAAGTTGTTCACATGAGAATGCGCCAATTCCCATCATCTAATCATCATGACCCTCCAATTTCATCTTCATCGAATCATCACCATCCAATTTCATCATCACCATCAGAGAATAACAATAATTTGAGCCAGACCAAGTCCCTTTTTTCCATAGACATGGTCCTTGATCATCAATCCAATATGGGACAGTCCCTTTGGTCATGCTAG 540 0.4667 MKEGGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLRTQLALAQAEVVHMRMRQFPSSNHHDPPISSSSNHHHPISSSPSENNNNLSQTKSLFSIDMVLDHQSNMGQSLWSC* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1805 179 Coils Coil 93 113 - -
Ahy18g1805 179 MobiDBLite consensus disorder prediction 126 154 - -
Ahy18g1805 179 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Ahy18g1805 179 MobiDBLite consensus disorder prediction 122 154 - -
Ahy18g1805 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 175 - -
Ahy18g1805 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 175 - -
Ahy18g1805 179 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1805 Ahy-Chr18 68392847 68399073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1805 1 179 AS2 family AT1G31320 67.598 4.15e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy18g1805 LOB 1.10E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1805 - - mnt:21399316 259.225