Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1781 ATGGCCAAGTCTTGTTCTAGTGAAAAGAACAATAATAATGGATTGAAGAAGGGTCCATGGACTCCGGAGGAAGATAAAAAACTCATTGATTACATTCAGAAACATGGGCATGGCAAGTGGCGAACCCTTCTTAAGAATGCAGGATTAAAGAGATGTGGAAAGAGTTGCCGGCTAAGGTGGGCTAATTACTTGAGGCCTGATATAAAGAGAGGAAGATTCTCATTTGAAGAAGAAGAAATGATCATCCAGTTACACACTGTTTTGGGAAACAAGTGGTCTACAATTGCTGCTAATTTACCCGGAAGAACAGATAATGAGATTAAGAATTATTGGAACACTCACATCAAGAAGAAATTGTTGAAGATGGGGATTGATCCAATAACTCATAAGCAATCCAAGAGGAAAAGTACCTAA 414 0.3865 MAKSCSSEKNNNNGLKKGPWTPEEDKKLIDYIQKHGHGKWRTLLKNAGLKRCGKSCRLRWANYLRPDIKRGRFSFEEEEMIIQLHTVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLLKMGIDPITHKQSKRKST* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1781 137 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Ahy18g1781 137 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Ahy18g1781 137 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Ahy18g1781 137 CDD SANT 72 115 IPR001005 -
Ahy18g1781 137 Gene3D - 72 137 - -
Ahy18g1781 137 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 131 - -
Ahy18g1781 137 CDD SANT 19 64 IPR001005 -
Ahy18g1781 137 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Ahy18g1781 137 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Ahy18g1781 137 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Ahy18g1781 137 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Ahy18g1781 137 Gene3D - 16 69 - -
Ahy18g1781 137 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 131 - -
Ahy18g1781 137 MobiDBLite consensus disorder prediction 1 21 - -
Ahy18g1781 137 SMART sant 16 66 IPR001005 -
Ahy18g1781 137 SMART sant 69 117 IPR001005 -
Ahy18g1781 137 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1781 Ahy-Chr18 63610327 63612075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1781 1 129 MYB Transcription Factor Family AT4G21440 81.395 7.69e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy18g1781 Myb_DNA-binding 3.40E-17 CL0123