Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1746 ATGATCGGTTCGGAAATCGAGATCCCAACCCACTTCGATCCATTCACTGAGGCCAAAGAATTGGGTGGCGTAGGGGCAAAGGAATATATCCATATCCGCATCCAGCAGAGGAATGGGAAGAAGAAACTGACCACAGTGCAAGGCTTGAAAGAATTGGGCTTAGAGAAGATACTCAAAGATCTCAAGAAAGAGTTATGTTGCAATGGCAATGTGGTTCAAGACAAGGAGCATGGCAAGATAATCCAGCTTCAAGGTGACCATCGCAAGAACGTTTCCCAATTGTTGGTTCAGGCTGGTCTTGTTATGAAGGATCAGATCAAGATTCATGGTTTTTGA 336 0.4464 MIGSEIEIPTHFDPFTEAKELGGVGAKEYIHIRIQQRNGKKKLTTVQGLKELGLEKILKDLKKELCCNGNVVQDKEHGKIIQLQGDHRKNVSQLLVQAGLVMKDQIKIHGF* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1746 111 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 111 IPR005874 GO:0003743
Ahy18g1746 111 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 111 - -
Ahy18g1746 111 SUPERFAMILY eIF1-like 8 111 IPR036877 GO:0003743|GO:0006413
Ahy18g1746 111 CDD eIF1_SUI1 28 110 IPR005874 GO:0003743
Ahy18g1746 111 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 99 IPR001950 GO:0003743|GO:0006413
Ahy18g1746 111 Gene3D - 2 111 - -
Ahy18g1746 111 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 111 - -
Ahy18g1746 111 Pfam Translation initiation factor SUI1 27 99 IPR001950 GO:0003743|GO:0006413
Ahy18g1746 111 PIRSF Transl_init_SUI1_Euk 1 111 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1746 Ahy-Chr18 56259404 56260967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1746 1 111 Eukaryotic Initiation Factors Gene Family AT5G54940 72.321 9.68e-54 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1746 K03113 - oeu:111395671 162.54