Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1745 ATGCCTAAGTTCTTGCATGATCTTGACGCTGTCAGCTCCCGTTCCCCTGAAGGAGCGTCTTTCGGGGGTCTGGGTGTACATCTGGTTGGGTTGAACGGAGAGTCTCAGTCGTTCGACAGCGCCAGCTGTCGAGCTCGCTCTGCTCAAACGGGCCCCGCCTCCTTCGCGAAGTTCCTCCGACGTGATGGGTCGCTCCATGTTCGCACTGGGAATCCCCACAGACGGTGCCAATGTTCGATACCCGGTGACCTCGTGTTATCGGTAGATGATGAATGGGAGAGAGAGGAGAGTTCCGAGTTGACGTGGAGCGGTGGAAATCGTACACCGGTGACATCGGAGGGTGGACGGAGAGGGGGATGGCCACCTGCAAGGACACTCCAACGATCAAGTCAGAGTCCCTTGCTCCTAGCTCTCTACTTCACTTGCATAGGTGGAGGAAGTGCCAAGGCAAAAGAGAATGCAGCAATAATGAATAGTTTCATTGAAGAACAAGAGGGGCATCTAGAGCTTCCATTGTTTGATCTATCTGGTTTAGCTAATGCTACTGGTAACTTTTCAATAAAAAACAAGTTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGATTATTGAAAAATGGGCAAGAAATTTCTATTAAAAGACTTTGTAGAGGTTCTGTACAAGGGCTTAAAGAATTCAAAAATGAAATTGCACCGATTGTCAAACTTCAACATCGTAATCTTGTGAAACTTCATAGATATTGCATTCACAATGAAGAGAAAATGCTTGTATATGAATACATGCCCAAAAAAAGTTTGGATTTCTTTATATTTGATTTTGGTTTGGCTAGAATTTTAGGAGGTGACCAAATTGCAGCAACAACGCGACGAGTGGTTGGAACATACGGATATATGGCACCTGAATACGCAATAGATGGAAACTTGTCAGTAAAATCTGATGTCTTTAGCTTTGGCGTTTTGTTACTGGAGATACTATCCGAAAAGAAAAACAAAGGAAATCATTGGGAAAATGAAAGCACAGATCTTATTGGCTATGCATGGGATTTGTGGACTAAAGAAAGGCCTCTAGAAACTGTTGATGATATTCTAATAGAGTCTTGTAACCTCTCTCAAGTATTGAGGTGCATTCATATTAGTCTTCTCTGTTTGGAGCAACATCCATATGCTAGACCAGACATGTCATCAGTGATTATGATGTTTGGAAGTGAAATTGCCTTGCCTAAGCCAAAACGACCTGCTCTATTTATTGGAGAATATGCATATCAATATGATCCTGCCAACGAATTCAGTATCGAAGTCCTAGAATCTAGATGA 1314 0.4338 MPKFLHDLDAVSSRSPEGASFGGLGVHLVGLNGESQSFDSASCRARSAQTGPASFAKFLRRDGSLHVRTGNPHRRCQCSIPGDLVLSVDDEWEREESSELTWSGGNRTPVTSEGGRRGGWPPARTLQRSSQSPLLLALYFTCIGGGSAKAKENAAIMNSFIEEQEGHLELPLFDLSGLANATGNFSIKNKFGEGGFGPVYKGLLKNGQEISIKRLCRGSVQGLKEFKNEIAPIVKLQHRNLVKLHRYCIHNEEKMLVYEYMPKKSLDFFIFDFGLARILGGDQIAATTRRVVGTYGYMAPEYAIDGNLSVKSDVFSFGVLLLEILSEKKNKGNHWENESTDLIGYAWDLWTKERPLETVDDILIESCNLSQVLRCIHISLLCLEQHPYARPDMSSVIMMFGSEIALPKPKRPALFIGEYAYQYDPANEFSIEVLESR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1745 437 Pfam Protein tyrosine and serine/threonine kinase 270 397 IPR001245 GO:0004672|GO:0006468
Ahy18g1745 437 Pfam Protein tyrosine and serine/threonine kinase 186 269 IPR001245 GO:0004672|GO:0006468
Ahy18g1745 437 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 152 272 - -
Ahy18g1745 437 ProSiteProfiles Protein kinase domain profile. 95 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1745 437 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 272 423 - -
Ahy18g1745 437 Gene3D Phosphorylase Kinase; domain 1 145 260 - -
Ahy18g1745 437 SUPERFAMILY Protein kinase-like (PK-like) 169 416 IPR011009 -
Ahy18g1745 437 Gene3D Transferase(Phosphotransferase) domain 1 268 410 - -
Ahy18g1745 437 MobiDBLite consensus disorder prediction 96 126 - -
Ahy18g1745 437 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 152 272 - -
Ahy18g1745 437 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 272 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1745 Ahy-Chr18 56244070 56246682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1745 134 414 Receptor kinase-like Gene Family AT4G23230 39.941 5.55e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1745 PK_Tyr_Ser-Thr 5.80E-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1745 - - aip:107611062 796.193