Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1714 ATGGACCTCAACACAAAACCGTTGGCAGAGGAGTTGGACGTCGATGAAGCTGGCTTCCACTTGTGTAACGAGGCTGGTCATAGGGAATCAAACAACGATATAGGAGATCTCAGAACAACCGCTGATGAGGGTCCTGTCGGTGAGAATCCTAGGGAGGGTATGTGCTTTGGCACTCTTCTTGAAGCGCGCAATTATTATCATCGTTATGCTGCAAAGATGGGTTTTGTACCAAAAATAAGGAACACAAATTATGAGAAGCACAGCAAGGATAAGATACCTATAAATCAATCCATGCATTGCAATAAAGATGGCCATCGTATATCTCAGAAAAGGGCACCCAAGAGAGCAAAAACAATCACATCTGTAGGCTGCAAAGCACGTTGTTATGTAAGGTTGGACAAGTCCACAGGTCTATGGAAAGTTTCAAAGTTAGAATTGTCTCATACACACCCGCTTAATCCGAAGCCTTCAGCCATCCTGGAGAATAGAGAGCTCTGCCAGCACACGAAAGATCTGATACAGCGTAATGATGAAGTCGATAGACAACCCAACAAGACCTTTCAGGCATCGACCAGTAAGTGTGTGGATATGGATAGAAAAATTTCTAGTCTCAATGCCATTCATCAGAGTCTTCTTACCAGCGGGACTACTGAATCAGCCGGAGAACATGGATCTTCATCAGCTACTCCTTCAGATGTCATAATTAAAGATGAGACCCCATTCCCGGTTAATAATCAAACTCCTTCCGATGTCATAATTAAAGACAAGTCCCCAATCCCGGTTAATATTCAAAATATTCCTGAAGAGCCATCGCCATCACCACTTCATTCTCTTCCAGAAAAGAATAGAAAGAAAGGCAAAGATACTGAGGCAGGTTGTGCTAGTGAAGTGGTGTCCGACCATGATTTTGGTTTCGTGTTAAAGAATACTTTTGATGCAGGTGGTTTTATCGACCAGTACCTTCTGGATTCATCAACTGTGGAGGTGTTGGAAAATATTCCTGCTAATGAGAACATTAGTAGGATGCAGCGAATGCTCCTAAAATCGGCAATCTTATGTCGCGACATGGAGAGGAGCTTTTCCGATTTGGAGAAGTTGAAGGAGAAGCTTGCAGCTAAAGAAAAAGAGATAGCTTTCCTCACTGCCCAAAATATTGAGCTATCCAGTAAAACTATTGAATTGTCTTCTCAAGTGTCAAGGTTAGTAGAGGAGAAAAAGACACTATCTTGTGACCTGAAAGCTTCTGAAAAGAAGGCCTCAGAGTTCAAGAGGAGCTTGGAGATTTCTAGGGACGAAATGGGTATTTTGAAGGATAACTATAAAAAACTTGGTATAGTAGTATTGGAGGGAGTGACTGATGTTGAGAAGAATATCAAGCAGCAAATTCAGTTGTTGGCTCCTAACTTGGATATTTCTAAAGTTGGGGCTTATCGTCATATTGTAAATGGTCAAATTGTTGACCTTCTTAACTAG 1473 0.4182 MDLNTKPLAEELDVDEAGFHLCNEAGHRESNNDIGDLRTTADEGPVGENPREGMCFGTLLEARNYYHRYAAKMGFVPKIRNTNYEKHSKDKIPINQSMHCNKDGHRISQKRAPKRAKTITSVGCKARCYVRLDKSTGLWKVSKLELSHTHPLNPKPSAILENRELCQHTKDLIQRNDEVDRQPNKTFQASTSKCVDMDRKISSLNAIHQSLLTSGTTESAGEHGSSSATPSDVIIKDETPFPVNNQTPSDVIIKDKSPIPVNIQNIPEEPSPSPLHSLPEKNRKKGKDTEAGCASEVVSDHDFGFVLKNTFDAGGFIDQYLLDSSTVEVLENIPANENISRMQRMLLKSAILCRDMERSFSDLEKLKEKLAAKEKEIAFLTAQNIELSSKTIELSSQVSRLVEEKKTLSCDLKASEKKASEFKRSLEISRDEMGILKDNYKKLGIVVLEGVTDVEKNIKQQIQLLAPNLDISKVGAYRHIVNGQIVDLLN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1714 490 MobiDBLite consensus disorder prediction 278 292 - -
Ahy18g1714 490 MobiDBLite consensus disorder prediction 214 292 - -
Ahy18g1714 490 MobiDBLite consensus disorder prediction 214 233 - -
Ahy18g1714 490 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 275 - -
Ahy18g1714 490 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 275 - -
Ahy18g1714 490 Coils Coil 353 390 - -
Ahy18g1714 490 Coils Coil 398 432 - -
Ahy18g1714 490 Pfam FAR1 DNA-binding domain 64 154 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1714 Ahy-Chr18 51864483 51875077 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1714 FAR1 1.00E-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1714 - - adu:107459405 885.945