Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1700 ATGGCGTTTTCAACCCCGGAAGGTGGATCGATTAGTACATTGATCAATCCAACACAAGGCGATGAACGATTCAGTGTGGGTGAAGTAGTTATTCAAGAGCAAGAAGGGTCGAAGGTCGACGAAATTACCGACGTCGTTGTGACTAGAAAGGATGAGTTAGACTACGGACACGAGTTGTCGAATCATAGTGGCGTCGGTGAAGATAAAATTCCAGTCATAGGAATGAGTTTTGGTTCGTTGCCTCTTGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTTGTTACTAAAATCAGGAACACAAATTTCGACAAGACGCGGAAGAAATCAAAGATACCGGTTAATCAATCTATTTACTCCACGCGAGAAGGTTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAATAGAATTACAGCCATGAGATGCAGAGAAAGGATGTATGTCATGCTGGACAAGGAGAAGGAAAGTTGGGTTGTGTCTAGATTAGAATTAAGGCATTCTCACCGCTGTTCGGCTAAGAAAGCTGTCCACTATCATGAGTACCGGGAGCTAACCATGCATGTTAAGTGTGTCATTACGGATAACTACGAGGCTGGAATAAGACCCAACAAGACATTTCTAGCACTGGCAAACGAGGTTGGTGGGTCCTCAAACCTGGATTTTTCAGAAAAGGATGTCAGAAATTACATCACACGCAATCTCCGATGCTCCGATGACAATGAGGACTTCCAGGGGATGATGAATTATTTTGTTCAAATGAAGGAGATCAATCCCAACTTCTTTTATGCCATAGATGTTGACGATGCTAATAAATTTAGGAGCGCACTATGGGTAGATGCAAGGTGCAGGACTTCGTATGAATATTACGGAGATGTGGTGTCGTTTGACACCACTTACAGAAGAAATAGGCATGGTCTGCCGTTTGCATCCTTTGTCGGTGTAAACCACCATGGGAAGTCTACTCTTCTTAGCTGTGTTTTACTTGGGAGCAAGGAGATCCCTAGTTTTGAGTGGGTGTTCACGCAGTGGGTGAGATGCGTCGGGACTACGCCAAGGCGATTATCACTGACCAGTGCAAGGCGATGGCCGGTGCTATTAGGAAGGTCCTACCTGATACTGTCCACCGATGACCTTTATGCGAATCGACGGAAGTGGGTTCCAATATTCTTCAAGAGTGAATTTTGGGCAGGCATGAGGAGTACACAGCATAGTGAAAGCATGCACGCATTTTATGGTGGATACCTGCATTACAAGAGTGGGTTGGTTCAGTTCGTCCATGAATACGACAATGTGCTTGGAAACAAGGAGCAAAAGAAGCTGGAAGATGATGCTGCAGACTCGAAAGGAGTCATCCATGTATAG 1374 0.4476 MAFSTPEGGSISTLINPTQGDERFSVGEVVIQEQEGSKVDEITDVVVTRKDELDYGHELSNHSGVGEDKIPVIGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKKSKIPVNQSIYSTREGYRESRVNAATRANRITAMRCRERMYVMLDKEKESWVVSRLELRHSHRCSAKKAVHYHEYRELTMHVKCVITDNYEAGIRPNKTFLALANEVGGSSNLDFSEKDVRNYITRNLRCSDDNEDFQGMMNYFVQMKEINPNFFYAIDVDDANKFRSALWVDARCRTSYEYYGDVVSFDTTYRRNRHGLPFASFVGVNHHGKSTLLSCVLLGSKEIPSFEWVFTQWVRCVGTTPRRLSLTSARRWPVLLGRSYLILSTDDLYANRRKWVPIFFKSEFWAGMRSTQHSESMHAFYGGYLHYKSGLVQFVHEYDNVLGNKEQKKLEDDAADSKGVIHV* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1700 457 Pfam MULE transposase domain 296 357 IPR018289 -
Ahy18g1700 457 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 381 447 IPR031052 GO:0006355
Ahy18g1700 457 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 357 IPR031052 GO:0006355
Ahy18g1700 457 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 61 357 - -
Ahy18g1700 457 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Ahy18g1700 457 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 381 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1700 Ahy-Chr18 49662170 49665140 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1700 FAR1 1.40E-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1700 - - ahf:112730161 722.235