Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1613 ATGACTGCTGGCACTCGAGGGGTTGTGGCTGGAGAGCTTGAACTGAATCATGAATGCAATTTGATGCACTGGTCACCAGAGGATTTCGAATCTAAATTGCAGGGGATCTTGATTAATGGGCAATTCCCAAGGCCCACTATAGATGCAGTTACAAATAATTTAAAAACACCAGGGGATGAATTGGAAGTGAATCTCAAGAGTTGGGCTGTTAGCTCAATATCTAGCTTTCAGAATATTTACTTTTTGGAGAATTTGATTGGGAAGGGTGGTTATGCTGAGGTTTACAAAGGGCGTTTGCCAAATCATCAGTTAGTAGCAGTTAAAAGACTAACAAGAGGAACAGCTGATGAAACTATATGTGACTTCTTATCAGAACTTGGAATCATGGCTCATGTAAGCCACACCAACACTGCTAAATTGGTTGGTTATGGTGTGGAAGGTGGAATGCATCTGGTTCTTGAATTGTCTGAAAAAGGAAGCCTAGCTTCAGTTCTTTATGGGTCCAAGGAGAAGCTTCCGTAGTCTATTAGGCAGAGAATTGCATTAGGAACAGCAGAGGGAATATTATATCTTCATGAAGGTTGTCAAAGAAGAATTATACATAGAAATATAAAAGCTGCAAATATCTTACTCACTGATGACTTTAAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTACCAGAGAATTGGAATCACCACAGTGTTACAAGATTTGAAGGGACATTTGGATACCTTGCTCTAGAATACTTACTCCATGGCATAGTAGACGAAAAAATAGATGTATTTTGCCTTGTTATCTAA 807 0.3941 MTAGTRGVVAGELELNHECNLMHWSPEDFESKLQGILINGQFPRPTIDAVTNNLKTPGDELEVNLKSWAVSSISSFQNIYFLENLIGKGGYAEVYKGRLPNHQLVAVKRLTRGTADETICDFLSELGIMAHVSHTNTAKLVGYGVEGGMHLVLELSEKGSLASVLYGSKEKLP*SIRQRIALGTAEGILYLHEGCQRRIIHRNIKAANILLTDDFKPQICDFGLAKWLPENWNHHSVTRFEGTFGYLALEYLLHGIVDEKIDVFCLVI* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1613 267 PANTHER PROTEIN KINASE FAMILY PROTEIN 60 265 - -
Ahy18g1613 267 PANTHER OS08G0249100 PROTEIN 60 265 - -
Ahy18g1613 267 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Ahy18g1613 267 Gene3D Phosphorylase Kinase; domain 1 50 154 - -
Ahy18g1613 267 SUPERFAMILY Protein kinase-like (PK-like) 74 265 IPR011009 -
Ahy18g1613 267 Gene3D Transferase(Phosphotransferase) domain 1 157 267 - -
Ahy18g1613 267 ProSiteProfiles Protein kinase domain profile. 80 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1613 267 Pfam Protein kinase domain 83 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1613 Ahy-Chr18 38297238 38301287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1613 61 267 Receptor kinase-like Gene Family AT1G53420 41.038 2.63e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy18g1613 Pkinase 1.20E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1613 - - ahf:112771472 540.036