Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1610 ATGTCTGCAACACCTCTCTCCAGTCACGAGCGTCACCTCTCCCCCTTAAAATATGTTTTCCTATCCGATTGGTGGCTTGCCAAGCCTTGCCTTCCACTCCAGGGCTTAGCGGTTGGTGGCATTGCTTATGGCCTGAGAGAGAGAATGTTCTTATCGACAGTGATTGCAAAGAGGCACGAGGCGAATGTCTTGGAGACCGAAGACGGAGTCACTCTTCACTTAAATAGTTTCATTAACAGCTCCCGCTCATCTCAGAATGGCTTCCCGCGCAAGGTATGCAAAGACTTCTTGTTGGGATTTCCAGACGATTGGCAAAAGTACACTGCTCATAGTTTTGGAGCTAAATGTGTCAATGGGGATACTGGATTTCATGAGCCAAATGCTTGTTCACGCAAGAGGGCTATTGATGCTATCCCATTTTCCATTCATGATAGGAAAAGTCTAGGAGGCCAACAATTTTGTTAA 465 0.4645 MSATPLSSHERHLSPLKYVFLSDWWLAKPCLPLQGLAVGGIAYGLRERMFLSTVIAKRHEANVLETEDGVTLHLNSFINSSRSSQNGFPRKVCKDFLLGFPDDWQKYTAHSFGAKCVNGDTGFHEPNACSRKRAIDAIPFSIHDRKSLGGQQFC* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1610 154 PANTHER INTERACTING FAMILY PROTEIN, PUTATIVE-RELATED 6 123 - -
Ahy18g1610 154 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 6 123 - -
Ahy18g1610 154 Pfam SANTA (SANT Associated) 19 107 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1610 Ahy-Chr18 38251909 38255078 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy18g1610 SANTA 1.90E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1610 - - aip:107614256 306.605