Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1588 ATGGAAGCTGCAGGTTTCCATATGTTTCTTGCTGATAATGAAGATGGTTTGGGTCTTAGAGAGAAAGTGGCAACAGCACCTAGTGCTCCACCTGCTACAACACCCCAGCCTGTCAGCATTGAAGAAGAATGTGCTGAGGTTGAAAGTTTGCGCCAAAAATTCAACAACAATTTATTCTCCATTAAACAAAGTTCTGACCTCTTAATGAGACTCCAGAATGAAGATAATGGAAGCAAGTCAACATTAAAGAGGTTGGAGACATTAGATTTCAGTTTCAATAACTTCAAGGAGAATATAATGGAGTTCTTGTATAGTCTAATATCCCTAAGGAAATTAATTCTTGCACATAACAAAATTGGTGGACTCTTTCCTAGCAAAGAACTATCAGTTTTATGCAACTTGAAGTCATTGGACTTGAGTTTCAATGATCTTAGCGGCAGCCTGACAACTCAAGGACCTTTTTCTCTGGGAAATTTGACATCGCTTCAAACTCTTGATCTCTCACATAACTCTTTGAGCGGGAACATTCCAGAACCTTTGCTTGCTAGACTTTCATCATTGGAGCATCTGTCTCTTTGTTTCAACAATTTTGAGGGTTTATTTTCATTGAACATTTTGGCTAATCAATCAAAGCTTAAGGTTTTGCAAATAGGACATATGAGTTCTAAAACATTTCAGGTTCAAACTGAAAACATCCCTTGGAATGCATCATTTCAATTGGAAGACTTAGAGATTTTCTCTTGTAAATTAAACCTACCTACAAGAACCTTTCCTTCTTTCCTTTCGTCTCAAAATGCCTTGAGACGAGTTGATCTATCAGAAGCCAATTTGGCTGGTACGTTTCCCAATTCGTTCTTCATGAACAAACCCAGATTGAAATATATGTTTTTATCAAAGAACTCATTTGTTGGATCTTTTGAGCTACCTGTTAATCAAAGTCAACAGATGAACCAATTATACACATTGGACATATCAAACAACTTGATTGAAGGTGAGCTTCCCACCAACATGGGGTTCTTCTTCCCATTTTTAGACTACTTGGATGTTTCAAGCAACAGATTTGATGGCTCTATTCCTTCATCAATTGGAGAGATGTCAACCTTGACTGTCTTGGATTTGTCATACAATAATTTTTCTGGGAATGTTCCCAAACACTTTTTTAAAGGATGCATCTCTCTACAATCATTGCTAGTGGACAATAACAATTTCAACGGAGCATTCCCAAGCTTTGTTAGAAGTCCGAACCTAACAAGAATAACAGCATCAAGGAATAATTTTGAAGGCCAAATAACAGAAGAGATGTGTGAACTGATTAGGCTTCTGGCTTTAGACTTGTCTTACAATAACTTCTCAGGTGCACTGCCTTCTTGCTTGAACATGCCATCTGCAGGACTCATTAGCTTGCAAGGAAATAGTCTTACGGGCACAATACCCGAAGCTGTGGGTGGCCTTCAAAGTTTGATGTTTCTTTTGTTGGGAGGTAATCAGTTGCAAGGCCAGATTCCCAATCAAATATGTCAGTTAAAATATTTGCAGATATTAGACCTTTCCCAAAATAATTTCACTGGCTCAGTACCTTCTTGCTTCAATAGTACTACGTTTGCTTCAGGGAAACAATCACTGTTGTTTGGATTTTTTTTCAATCCGTTGCTACAACTCATAATAAAAGGTTTATCCCTTTCGTACAATACAGAATTGCTTGAAATCATTACAGTTTTGGACTTGTCATCTAATCAATTGACAGGAGAAATTCCGGACCAAATAGGAGACCTGAGTGGCCTTCATGCACTCAATTTATCCCACAACCATTTGGAAGGTCCAATTCCAACAAGCTTCCACAATCTACAAAGCATTGAGAGTATGGATCTTTCAAATAACAGTTTGAGTGGTGAAATTCCTCTACAGTTAGAGGACTTGCACTATTTATCTGTCTTCAATGTGTGCTACAACAATCTATCAGGTAAAGCACCTAACCAAGGACAATTTGGTACTTTTGATGAGAGTAGTTATAGAGGAAATCAATATCTCAAGTGGGGTAATAGTAATAGAGGCAATGCAACACTTCTTCCACCTCCTCCAAATCTGCCTAGTGGAGGAGACAATGACGATTCTGTAATTGATTTCACTTCTTTCTGTTGGAGTTCTGTTGCATCCTTTGTCACAGTGCTCTTAACATTTGTGACGATTCTTTGGATCAATCCTTATTGGCGCAGAGTATGGTTTTATTTTATGGAAGAGCTCCTCTTTAAATGCTTTGGTTGGTTCCTTGAAGATGCATTCTACTAG 2286 0.381 MEAAGFHMFLADNEDGLGLREKVATAPSAPPATTPQPVSIEEECAEVESLRQKFNNNLFSIKQSSDLLMRLQNEDNGSKSTLKRLETLDFSFNNFKENIMEFLYSLISLRKLILAHNKIGGLFPSKELSVLCNLKSLDLSFNDLSGSLTTQGPFSLGNLTSLQTLDLSHNSLSGNIPEPLLARLSSLEHLSLCFNNFEGLFSLNILANQSKLKVLQIGHMSSKTFQVQTENIPWNASFQLEDLEIFSCKLNLPTRTFPSFLSSQNALRRVDLSEANLAGTFPNSFFMNKPRLKYMFLSKNSFVGSFELPVNQSQQMNQLYTLDISNNLIEGELPTNMGFFFPFLDYLDVSSNRFDGSIPSSIGEMSTLTVLDLSYNNFSGNVPKHFFKGCISLQSLLVDNNNFNGAFPSFVRSPNLTRITASRNNFEGQITEEMCELIRLLALDLSYNNFSGALPSCLNMPSAGLISLQGNSLTGTIPEAVGGLQSLMFLLLGGNQLQGQIPNQICQLKYLQILDLSQNNFTGSVPSCFNSTTFASGKQSLLFGFFFNPLLQLIIKGLSLSYNTELLEIITVLDLSSNQLTGEIPDQIGDLSGLHALNLSHNHLEGPIPTSFHNLQSIESMDLSNNSLSGEIPLQLEDLHYLSVFNVCYNNLSGKAPNQGQFGTFDESSYRGNQYLKWGNSNRGNATLLPPPPNLPSGGDNDDSVIDFTSFCWSSVASFVTVLLTFVTILWINPYWRRVWFYFMEELLFKCFGWFLEDAFY* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1588 761 Gene3D Ribonuclease Inhibitor 39 149 IPR032675 -
Ahy18g1588 761 Gene3D Ribonuclease Inhibitor 388 683 IPR032675 -
Ahy18g1588 761 SUPERFAMILY L domain-like 336 657 - -
Ahy18g1588 761 PRINTS Leucine-rich repeat signature 159 172 - -
Ahy18g1588 761 PRINTS Leucine-rich repeat signature 134 147 - -
Ahy18g1588 761 SUPERFAMILY L domain-like 80 384 - -
Ahy18g1588 761 SMART LRR_typ_2 131 152 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 159 183 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 184 203 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 365 389 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 567 591 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 615 639 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 437 460 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 82 106 IPR003591 -
Ahy18g1588 761 SMART LRR_typ_2 484 508 IPR003591 -
Ahy18g1588 761 PANTHER RECEPTOR-LIKE PROTEIN 14 152 742 - -
Ahy18g1588 761 PANTHER RECEPTOR-LIKE PROTEIN 14 68 178 - -
Ahy18g1588 761 PANTHER RECEPTOR-LIKE PROTEIN 14 152 742 - -
Ahy18g1588 761 PANTHER RECEPTOR-LIKE PROTEIN 14 68 178 - -
Ahy18g1588 761 Pfam Leucine rich repeat 466 521 IPR001611 GO:0005515
Ahy18g1588 761 Pfam Leucine rich repeat 344 403 IPR001611 GO:0005515
Ahy18g1588 761 Pfam Leucine rich repeat 571 628 IPR001611 GO:0005515
Ahy18g1588 761 Pfam Leucine Rich repeat 132 146 IPR001611 GO:0005515
Ahy18g1588 761 Gene3D Ribonuclease Inhibitor 150 387 IPR032675 -
Ahy18g1588 761 Pfam Leucine Rich Repeat 161 178 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1588 Ahy-Chr18 36118090 36124508 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1588 74 750 Miscellaneous Gene Families AT1G74190 33.841 4.67e-114 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1588 - - ahf:112769935 1493.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1588 18 36118090 36124508 Ahy7g2009 7 76561068 76563276 hybridization