Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1583 ATGGCAATGCTACGAAAGCTGCTGCCAAGGCGGAAAAGTATTCTCACTGATATTGCTGAAGCAAAATACAACTACTGGTCTACCTTTGCGGCTAATCCTTTTGAAGTTGTATTAGTTGCAGGAAAGAAAGCAAAACTACCAGGAGGAGATGAGGAAGAAAATAAATGTGACTTGAAGGACCTTACCGGGGAGGGAAATATTGAGAGCATGCTTTTTTTCAAGCAAGGGTTACGGGAATTAGCTTCACTAAAGGCATCCCCAGTATTCATCTTTGCAAACCAAGCCGAACTTGACATGCTCGAAACTACTCTTGTCGCCCTTCAAGACATTATGCTCAACAAAGTTCTTGATGAATCTGGCAAGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGCTATGTTCATCGAGTGGGTCATATAGCAAGAGCTGGCCGAGAAGGATGTGCCATCACATTTGTGACTGA 471 0.4289 MAMLRKLLPRRKSILTDIAEAKYNYWSTFAANPFEVVLVAGKKAKLPGGDEEENKCDLKDLTGEGNIESMLFFKQGLRELASLKASPVFIFANQAELDMLETTLVALQDIMLNKVLDESGKKILCSEFSKIMQQLCSSSGSYSKSWPRRMCHHICD* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1583 156 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 81 138 IPR044830 GO:0003700
Ahy18g1583 156 Pfam MEKHLA domain 82 134 IPR013978 -
Ahy18g1583 156 PANTHER BNACNNG38170D PROTEIN 81 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1583 Ahy-Chr18 35803803 35807589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1583 84 134 Homeobox Transcription Factor Family AT1G30490 80.392 1.83e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1583 K09338 - ahf:112770971 313.923