Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1579 ATGTTTTCACCAAAGGATAACGGCCATGACAGGATTCGGGAGGTAGAGCACCATCTTGTGAGGCCATCAATGGAGATGAAGGAAGGAACGCCGAGAAGCCATGACAGTGAGAACGAGACTAATGATGATGGTGGGATTGAGGATGCGAATGAAGTGAATGATGATGAAGGGGCTGATGATGAGACAGGCTATGGATCAGTGGAATCTGGTGCAATACTTTACAGTGAAGAAGATGATATCATGACTATTCTCCAAGCACAGAATGAAGAGATTGCTCATAAGAGGAGATTGGCTAAACAAAAAGGGAAAATAAGACGATGCAAACCCAATAATTCTAAAAAGGAGAGGTCTATCATGGTGCGTTTCAGAGATGGTTTAGTGAAACGAATAGATGAAGATGAATCAAAAGCTTTGGAAGTATTGCCATCTGTTGAGGAGATCAGAGAGGGGGATAAGTTGATATCATTACAAAGGAGGTTCATGTGGAGTAAGGAGGATGGAAAGAATGGCATAGCGATGGTAAGGAGTAAGAAAAATCAATCAAAGATGAGTAGCTTACAATGGAAGAAACTGAAAGTCTTGGAAACGGGTTTTTATGGTACTGTTTATCTTGCAATTGTTGTTGATACACAAACACCGTATCAGAGCTTCATTGCTGTAAAGAGATCCATTTTCAGATTGGCATTCTCACTGAAGAAAGAAGAACAGATTTTTAAATCATTGTGCGAAGGTGAAAGCAGTGGTTGCGAAGAAATCATTCGATGCTTTGGAATTGAGACCACGGTAGAGCACAGACCTTATTTTTACAATCTTCTGTTGGAGTATACTCCTCACGATTCTTTGGATGACTTAATCCACAAGAAACTTCTGCTGGGGACCGACGTGAGCGTCAATGCACACGTGATTGTTAAAGGACTTTCGCATATTCATCGTAAAGGAATTGTCCACTGTGACCTCAAGCTGGAGAACATTATTTTGTTTCCTTCATTGGACAAAGAGAGTACAAAATATCAATTGAAGATCGCAGATTTTGGATTATCTAAGACCAAAGAGGAAGAAGCAGATGTTGAGGTTTGGAAGTCCAAGCCTAGAGGTATGCCATCATACTTGTCGCTAGAGGAATTTTCCAATCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGTTGGTATTACAAATGCTCAATGGATTGCCTGCATGGGGTGAGAGCTTTTTGCGTACTGAGGAGTATTTGAGGTTCTTCGTTGAGTATCTTGAACTATCACCAAAGAAGCCGAAAGAAATCAGTATTTTCTGTTATGATTTTCTGGAAAAGTGCTTTATGAAGGATCCTAACAAGAGGTGGACTATTGACATGCTTCTTGATCATCCTTTTCTTTATATCACACTTTTCTATTCATATCATCCTTTTCTTTATGGTTCATGTAGTTAG 1452 0.3988 MFSPKDNGHDRIREVEHHLVRPSMEMKEGTPRSHDSENETNDDGGIEDANEVNDDEGADDETGYGSVESGAILYSEEDDIMTILQAQNEEIAHKRRLAKQKGKIRRCKPNNSKKERSIMVRFRDGLVKRIDEDESKALEVLPSVEEIREGDKLISLQRRFMWSKEDGKNGIAMVRSKKNQSKMSSLQWKKLKVLETGFYGTVYLAIVVDTQTPYQSFIAVKRSIFRLAFSLKKEEQIFKSLCEGESSGCEEIIRCFGIETTVEHRPYFYNLLLEYTPHDSLDDLIHKKLLLGTDVSVNAHVIVKGLSHIHRKGIVHCDLKLENIILFPSLDKESTKYQLKIADFGLSKTKEEEADVEVWKSKPRGMPSYLSLEEFSNHIDAPMDIWALGCIVIEMLVLQMLNGLPAWGESFLRTEEYLRFFVEYLELSPKKPKEISIFCYDFLEKCFMKDPNKRWTIDMLLDHPFLYITLFYSYHPFLYGSCS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1579 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Ahy18g1579 483 Pfam Protein kinase domain 190 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1579 483 ProSiteProfiles Protein kinase domain profile. 188 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1579 483 MobiDBLite consensus disorder prediction 1 40 - -
Ahy18g1579 483 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 187 469 - -
Ahy18g1579 483 MobiDBLite consensus disorder prediction 1 65 - -
Ahy18g1579 483 SMART serkin_6 188 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1579 483 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 187 469 - -
Ahy18g1579 483 MobiDBLite consensus disorder prediction 41 62 - -
Ahy18g1579 483 SUPERFAMILY Protein kinase-like (PK-like) 187 470 IPR011009 -
Ahy18g1579 483 Gene3D Transferase(Phosphotransferase) domain 1 178 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1579 Ahy-Chr18 35627328 35683610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1579 186 468 MAP Kinase Kinase Kinase AT4G36950 36.897 2.46e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy18g1579 Pkinase 1.30E-37 CL0016