Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1565 ATGCTTAATTGCCTAACTTATTTACTTTCAAGTCCCTGCAAATTTTGCACAAACTTCAAACTTCAAAGCATGAAACTCATAACTATCTTCTTTCTCTCCCTCCTTGCATCACCATTAGTTTCTGGAGCCACTCTAAAACAACAGGAAGTGGAAGTTCTCAAAGAGATTGGGAACACGCTTGGGAAGAAGGATTGGGACTTCAGCGTAGATCCATGTAGCGGAGAAAGGAATTGGACTTCCCCTGCTTCAAAATCTTATTCAGAACTAAATGCAGTAACTTGTGATTGTTCTTTCTCTAATCACACTCTCTGCCATGTAGTTAGCATAGTTCTGAAATCACAAAATCTTTCTGGTAGTCTTCCGCCACAGCTTGCAAGGTTGCCTTACCTACAAGAAATTGATCTCACCCTCAACTACCTTAACGGCACAATTCCAAAGCAATGGAGTTCCTTGAATCTTGTCAACATTTCTCTTTATGGAAATCGAGTAACAGGTTCAATCCCAAAGGAACTAGGAAATATAACCACTCTCAAAAGTTTGGTCCTGGAGTTCAATCAATTATCTGGAAATCTACCTATGGAGCTTGGGAGCCTTCCCCAAATTGAAACACTACTTCTTACTTCCAATAATTTCACTGGAGAGTTGCCTGCATCATTTGCTAACCTCACTACACTGAAGAACATTCGACTAGGTGACAATCAATTCTCTGGATCAATACCCAATTTTATTCAGAACTGGAGAAGTGTTGAGACAATGGTAATCCAGGGTAGTGGCTTCAGTGGACCAATTCCTTCAGGAATTTCACTTATGAAGAACCTTACTGACTTGAGAATTAGTGACTTGAATGGATCCGATTCACCTTTTCCCCAACTTGATAGAATCACAAATTTGCAAACACTAATGTTGAGGAGTTGCAATATTATTGGAGCAATGCCTGAAAATCTTGGGAACTTGACTAATTTGAAAGTTCTAGATCTCAGCTACAACAAAATAAGTGGGCAGATTCCGAGCAGCTTTGCTGAACTACAGAAAATGGACATGCTATTTTTAACTAGGAACCTTCTAACTGGACCACTGCCCGATTGGATATCTAAACCAGATTTTGTAGATCTCTCATTTAACAACTTCAGCATAAGAAAGTCAGAGGAGCCAGGTTGTCAACAGGGAAGCACGAACTTGTTTGCATCCTCCGTGAATGGCAATAGCATAGGAAATATTTCATGTCTGCAAAACACTGGCTGTACTAAAACTTGGTACTCTCTCTATATAAATTGTGGTGGAAAGCAAGTAGTTTCTATTGGAAATAAGACATATGATGATGATTCGGGTACGACTGGACCAGCAAGATTTCTCTCTGAAGGAACAAACTGGGCACTCATTACCACCGGTCACTTCTTCGACAGTGGTCGTGCAGACTACTACACATGGTCTACTACAAATAAACTTGCAATGGAAAATGATGAACTGTATAGGGATGCACGTGTTTCTCCCGTTTCTCTGACTTATTATGCATTTTGCCTGGGAAATGGAAACTACACAGTAAATCTTCATTTTGCGGAGATAATGTTTACAGATGATAAAACATATAGCAGTCTGGGAACGCGTGTATTTGACATCTACATTCAGAGAAAGTTAGTGTTGAAGGATTTCAATATTGCAAAGGAAGCAGGGGGTGTTGGGAAGGCAGTAATAAAAAATTTCACTGCTGTTGTGAATGCTAAAGCCTTGGAGATCCGTTTATATTGGGCTGGAAAAGGGACAACTACTATTCCATTTGGATCAGTATACGGTCCTCTTATATCAGCTATATCTGTTGATCCAGGTGGGCTGTACTTGTTCAAAGTTTCTTATTCGTGCCATCTCCTCCATTATCTAATCTTATCTAAAGTTCTTACATGTAACAAAGCAGATTTTGTACCACCTCCTCCTTCGGTGAATGGTGGTGGCTTGTCTGTAGGCGCTATTGTTGCCATTGTTGTTGCAGGAGCAATTATTATCATATTGATTTTTGGCATACTTTGGTGGAAGCACTGTTTTGAACAAAAAAGTTCAGTGCCTAAAGAACTCAAGGACATAAACTCACAAACTACCATATTCACATTAAGGCAAATAAGAGCAGCAACAAACAACTTTGATAGAGCCTTCAAGATTGGACAGGGAGGATTTGGTCCTGTGTACAAGGGTGTCTTATCAGATGGCACAAGAATTGCAGTTAAGCAACTTTCCGATAAATCAGTGCAAGGGAATCGTGAGTTTATAAATGAGATTGGAATGATTTCTGCCTTGCGGCACCCTTACTTGGTTAAACTCTATGGATTTTGTATGGAGGAGGATCAGTTGTTGCTTGTATATGAATACATGGAGAATAATAGCCTTGCACATGCTTTATTCGATGGAAATTATGACAGGAAAACTGAATTGAGATTACACTGGCAAACAAGACAGAGGATTTGTGTCGGTATTGCTAAAGGTTTGGCTTACCTTCATGGAGAATCAAGATTGAAGATCGTTCATAGGGACATTAAAGCCACCAATGTGTTGCTGGATAAAGATCTCAACCCGAAGATTTCAGATTTTGGTTTGGCCAAGCTTGATGAACAAAACAAAACACACATAAGCACCAGAATAGCGGGAACTTATGGGTACATCGCTCCGGAGTATGCGATGCATGGTTATTTGACGGACAAAGCTGATGTTTATAGTTTTGGAATAGTCGCTTTGGAAATAGTTAGTGGGAAGAGCAATACGCTTACCAACCCCACAGATGAATTCTTCTCTCTACTTGATTGGGCAAATCTCTTGAAAGAAAAAGGCAATCTGTTGGAACTTGTTGATGGGAGGTTGGGTGAAGACTTAAACAAAGAGGAGGCACTGGTGATGATCAAAGTGGCTCTTCTATGCACCAATGCCTCTCCGGTGCTCCGGCCCACCATGGCTTCAGTGGTAAGCATGCTTGAAGGAAGCACAGTTGTTCCAGATGTTATGCCAGGCACAAATGATTTATTGGATGAGAAGAAATTTGAGATGATGAGACAACATTACCAACAACATAGGGGAGAGAGAGAGATAAGTGAGACTCCAAGCTACGGTATCTCAGTTGGTGAAACTAGTGCAATTGTAACTGACACTGATTCTTCTTTTTTGAATGCCAGAGATTAA 3159 0.4033 MLNCLTYLLSSPCKFCTNFKLQSMKLITIFFLSLLASPLVSGATLKQQEVEVLKEIGNTLGKKDWDFSVDPCSGERNWTSPASKSYSELNAVTCDCSFSNHTLCHVVSIVLKSQNLSGSLPPQLARLPYLQEIDLTLNYLNGTIPKQWSSLNLVNISLYGNRVTGSIPKELGNITTLKSLVLEFNQLSGNLPMELGSLPQIETLLLTSNNFTGELPASFANLTTLKNIRLGDNQFSGSIPNFIQNWRSVETMVIQGSGFSGPIPSGISLMKNLTDLRISDLNGSDSPFPQLDRITNLQTLMLRSCNIIGAMPENLGNLTNLKVLDLSYNKISGQIPSSFAELQKMDMLFLTRNLLTGPLPDWISKPDFVDLSFNNFSIRKSEEPGCQQGSTNLFASSVNGNSIGNISCLQNTGCTKTWYSLYINCGGKQVVSIGNKTYDDDSGTTGPARFLSEGTNWALITTGHFFDSGRADYYTWSTTNKLAMENDELYRDARVSPVSLTYYAFCLGNGNYTVNLHFAEIMFTDDKTYSSLGTRVFDIYIQRKLVLKDFNIAKEAGGVGKAVIKNFTAVVNAKALEIRLYWAGKGTTTIPFGSVYGPLISAISVDPGGLYLFKVSYSCHLLHYLILSKVLTCNKADFVPPPPSVNGGGLSVGAIVAIVVAGAIIIILIFGILWWKHCFEQKSSVPKELKDINSQTTIFTLRQIRAATNNFDRAFKIGQGGFGPVYKGVLSDGTRIAVKQLSDKSVQGNREFINEIGMISALRHPYLVKLYGFCMEEDQLLLVYEYMENNSLAHALFDGNYDRKTELRLHWQTRQRICVGIAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEQNKTHISTRIAGTYGYIAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLTNPTDEFFSLLDWANLLKEKGNLLELVDGRLGEDLNKEEALVMIKVALLCTNASPVLRPTMASVVSMLEGSTVVPDVMPGTNDLLDEKKFEMMRQHYQQHRGEREISETPSYGISVGETSAIVTDTDSSFLNARD* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1565 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Ahy18g1565 1052 Gene3D - 418 607 - -
Ahy18g1565 1052 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 398 1007 - -
Ahy18g1565 1052 ProSiteProfiles Leucine-rich repeat profile. 320 342 IPR001611 GO:0005515
Ahy18g1565 1052 Gene3D Ribonuclease Inhibitor 209 281 IPR032675 -
Ahy18g1565 1052 Gene3D Transferase(Phosphotransferase) domain 1 787 993 - -
Ahy18g1565 1052 Gene3D Ribonuclease Inhibitor 47 208 IPR032675 -
Ahy18g1565 1052 Pfam Protein kinase domain 715 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1565 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 398 1007 - -
Ahy18g1565 1052 SUPERFAMILY L domain-like 88 411 - -
Ahy18g1565 1052 Pfam Leucine rich repeat 295 355 IPR001611 GO:0005515
Ahy18g1565 1052 Gene3D Phosphorylase Kinase; domain 1 675 786 - -
Ahy18g1565 1052 CDD STKc_IRAK 717 987 - -
Ahy18g1565 1052 Gene3D Ribonuclease Inhibitor 282 407 IPR032675 -
Ahy18g1565 1052 SMART serkin_6 711 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1565 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 93 308 - -
Ahy18g1565 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 309 365 - -
Ahy18g1565 1052 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 309 365 - -
Ahy18g1565 1052 Pfam Malectin domain 420 603 IPR021720 -
Ahy18g1565 1052 ProSiteProfiles Protein kinase domain profile. 711 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1565 1052 SUPERFAMILY Protein kinase-like (PK-like) 693 987 IPR011009 -
Ahy18g1565 1052 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 93 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1565 Ahy-Chr18 34975579 34984843 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1565 39 991 Receptor kinase-like Gene Family AT1G53420 52.665 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1565 Pkinase 3.30E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1565 - - ccaj:109799273 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1565 18 34975579 34984843 Ahy18g1565 18 34975579 34984843 ECH