Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1557 ATGAAAGAGATAGCAAAGAAGGTTGGGAAGAATGACTGGAACTTCAGCGTGGATCCATGCAGTGGATTAGAGAACTGGAACTCATCAAACGCAGTCAAAGGAATGCTAATAAATGCAGTGACATGTGACTGCTCCTTTGCCAATGCCAATGTTACTGTTTGCCATGTTGTTAGCATTGTTCTAAAGTACCAGAATCTTACGGGCACACTCCCAAGTGAACTAGTGAAGTTGCCATACCTCCAAGAAATTGACCTCACCCGCAACTACCTTAACGGCACAATTCCACCACAATGGGGCTCCATGAAACTTGTCAACATTTCCCTTCTTGGAAATCGACTAACAGGTTCAATTCCAAAGGAGTTGGGAAACATTACCACCCTGAAAAGTTTGGTTTTGGAGTTCAATCAACTCACCGGAGAGCTTCCTCCTGAGCTTGGAAATCTTTCCCAGCTTGAAAGACTGCATCTTACTTCGAACCATTTTACTGGGAATCTACCTGCTACATTTGCTAAGCTCACTAAATTGAATCACGTTCGACTAGGCGATAATCAATTTTCTGGAACTATACCAAATTTTATTCAGAGCTGGACTACTCTTCAGAGGCTGGTGGTGCAAGGGAGTGGTATGAGTGGACCAATTCCTTCTGGAATTTCACTTTTGAAAAACCTCACCGACTTGAGAATCGCTGACTTGAAAGGACCAGGATCTTATTTTCCACCACTTAGTAACTTGACAAATCTAGAAACATTAGTACTGAGGAGTTGTAATCTGATAGGAACAGTGCCTGACTATCTAGAGAATGTGACTACACTAAAATCACTAGACCTTAGTTTTAACAAATTAAGTGGAACCATTCCAAGCTCCTTCAGTCGCCTATTGAACATGAACATACTGTACTTAACTGGAAACCTTTTTACTGGACCGCTACCTAATTGGATAGCTAACCCAGACTATACAGATCTTTCATATAACAACTTCAGCATCAAAGAGCCAGAGCTGTTGACTTGTCAACAAGGAAGCGTGAACTTGTTTGCATCATCTATGAAGGAACATAACTTGGGAGTTGTTCCATGTTTGGGAAACATTAATTGTTCTAAACCTTCATATTCTCTCCATATAAATTGCGGTGGGAAACTCATAACTTCTAGTGGGAATATTACATATGATGAAGATACACAAGAAGCTGGACCGGCAAGATCTCTTCGTGCCGGATCAAACTGGGCAGTTAGCAACACTGGTCACTTCTTTGATAGTAGTTTTGGGGACTATTATACATGGTCTAATACATCTAAGCTTACCATGAACAATGCTGAATTGTACACGAATGCACGTGTTTCTGCACTTTCTCTGACATATTATGGTTTTTGCATGAGAAATGGAAGCTACACAGTAAATCTCCATTTTGCTGAGATAATGTTTACAGATGATCAAACATATAGCAGCCTTGGAAGGCGTGTATTTGACATCTATATTCAGAAGAAATTGGTCCTAAAAGATTTTGATATTGCAAAAGAAGCAGGAGGAGTTTGTAAGGCAATCATAAAGAAATTTACCGCTAATGTGACCAGCAGCACCTTGGAGATTCGCTTACAATGGGCTGGGAAAGGGACAACAGCTATTCCATTTGGATCAGTATATGGTCCTCTAATATCAGCTATATCTGTAAATCCTGACTTTATGCCACCAGTGGAAAAAGAAACTAACAAAAGTGGAAGTGGCATATCTGTGGGGGCTATAGTTGTAATTGTAATTGCTGGAGCACTTGTTATCGTCTTCGTATTTGGTATATCCTGGCGGCGAGGATGTTCAGGACAAAAAGGTTCATTATATAAAGATCTACAGGGTTTGGATCTAAAAACCGATGTATTTACCTTGAGGCAAATCAAAACAGCAACTAACAATTTCGATATTGCTTATAAGATTGGACAAGGAGGGTTTGGTACTGTTTACAAGGGTGTTCTTTCAGATGGCACAGTAGTGGCAGTTAAACAGTTTTCTTCTAAATCGAGGCAAGGGAATCGCGAGTTCATAAATGAGATTGGCATGATTTCGGCTTTGCAACACCCCTGTCTAGTTAAGCTCTATGGCTGTTGTATGGAGGGAGATCAATTGTTGTTGATATACGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTGTTTGCCCAAGAAAAAGGTCAACTGAAATTGGATTGGTCAACAAGGCGCAAGATTTGTCTTGGCGTTGCTAAAGGCTTGGCTTACCTCCATGGAGAGTCAAGGTTAAAGATAGTTCATAGAGATATCAAGGCCACCAATGTATTACTGGATAAAGATCTAAACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGATGATGGACTTACCCACATAAGCACTAGAGTGGCTGGCACCTATGGATATATGGCTCCAGAATATGCAATGCGCGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAGTAGTTAGTGGCAAAAGCAACAATATGAACTGGCAAAAGGAAGAATGCTTTTCTCTTCTTGATTGGGCTCTTCTCTTGAAAGAAAAAGGTGATCTATTGGACCTAGTTGATGAGAGGTTGGGTTCAGACTTGAACGAAAATGAAGCAATGCTCATCATCAATGTGGCTCTTCTATGCTCAAATTTCTCTTCATTGCACAGGCCAACCATGTCTTCAGTGGTAAGAATGCTCGAAGGCAAAAGCGCAGTTCAAGAGGCCATGCCGGACACAACCCAGGTATTCGATGAGAAGAAGTTAGAAATGATGAGAAACTGTTACCAACAGAGAGGAAAACATAAGATTCCAGACACTCATGAACATAGCACCTTAATAGTTGAAACTGCTGCTTTTATGACTAATTCAGAGGTCCATTCAGCCAACATGGATTCTTCTTCCTGGGAGGAAAGTACTAGATGA 2943 0.4067 MKEIAKKVGKNDWNFSVDPCSGLENWNSSNAVKGMLINAVTCDCSFANANVTVCHVVSIVLKYQNLTGTLPSELVKLPYLQEIDLTRNYLNGTIPPQWGSMKLVNISLLGNRLTGSIPKELGNITTLKSLVLEFNQLTGELPPELGNLSQLERLHLTSNHFTGNLPATFAKLTKLNHVRLGDNQFSGTIPNFIQSWTTLQRLVVQGSGMSGPIPSGISLLKNLTDLRIADLKGPGSYFPPLSNLTNLETLVLRSCNLIGTVPDYLENVTTLKSLDLSFNKLSGTIPSSFSRLLNMNILYLTGNLFTGPLPNWIANPDYTDLSYNNFSIKEPELLTCQQGSVNLFASSMKEHNLGVVPCLGNINCSKPSYSLHINCGGKLITSSGNITYDEDTQEAGPARSLRAGSNWAVSNTGHFFDSSFGDYYTWSNTSKLTMNNAELYTNARVSALSLTYYGFCMRNGSYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQKKLVLKDFDIAKEAGGVCKAIIKKFTANVTSSTLEIRLQWAGKGTTAIPFGSVYGPLISAISVNPDFMPPVEKETNKSGSGISVGAIVVIVIAGALVIVFVFGISWRRGCSGQKGSLYKDLQGLDLKTDVFTLRQIKTATNNFDIAYKIGQGGFGTVYKGVLSDGTVVAVKQFSSKSRQGNREFINEIGMISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLARALFAQEKGQLKLDWSTRRKICLGVAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDDDGLTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGIVALEVVSGKSNNMNWQKEECFSLLDWALLLKEKGDLLDLVDERLGSDLNENEAMLIINVALLCSNFSSLHRPTMSSVVRMLEGKSAVQEAMPDTTQVFDEKKLEMMRNCYQQRGKHKIPDTHEHSTLIVETAAFMTNSEVHSANMDSSSWEESTR* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1557 980 Pfam Leucine rich repeat 245 304 IPR001611 GO:0005515
Ahy18g1557 980 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Ahy18g1557 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 757 769 IPR008271 GO:0004672|GO:0006468
Ahy18g1557 980 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 47 258 - -
Ahy18g1557 980 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 257 334 - -
Ahy18g1557 980 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 354 953 - -
Ahy18g1557 980 SUPERFAMILY Protein kinase-like (PK-like) 619 914 IPR011009 -
Ahy18g1557 980 ProSiteProfiles Protein kinase domain profile. 635 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1557 980 Gene3D Phosphorylase Kinase; domain 1 605 710 - -
Ahy18g1557 980 Gene3D Ribonuclease Inhibitor 164 363 IPR032675 -
Ahy18g1557 980 CDD STKc_IRAK 641 908 - -
Ahy18g1557 980 Pfam Malectin domain 370 553 IPR021720 -
Ahy18g1557 980 Gene3D - 367 558 - -
Ahy18g1557 980 SUPERFAMILY L domain-like 50 326 - -
Ahy18g1557 980 Pfam Protein kinase domain 638 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1557 980 SMART serkin_6 635 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1557 980 Gene3D Transferase(Phosphotransferase) domain 1 711 923 - -
Ahy18g1557 980 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 258 - -
Ahy18g1557 980 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 257 334 - -
Ahy18g1557 980 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 354 953 - -
Ahy18g1557 980 Gene3D Ribonuclease Inhibitor 10 163 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1557 Ahy-Chr18 34648654 34658528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1557 50 941 Receptor kinase-like Gene Family AT1G53420 55.556 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1557 Pkinase 7.30E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1557 - - gmx:100786496 1440.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1557 18 34648654 34658528 Ahy7g2030 7 77025864 77035178 hybridization