Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1551 ATGGGGAGCGTTCACAAAAATTCAACAAAGAGTTCTGTTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCAAGTGAAGAAAATGATATAAGTATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTTGATCCTGGAGATGGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAAGGATGACATTTGGGGTATTGAGCATGATAGTGTAGAGCAGTGTGTTCAATTCTACAAAAATTATGCCAAAGTACATGATTTTGTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAACGACAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAGAAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCCAGAATTAGATTTCACTATGATATGAAATTGAGGAAGTGGAAAGTCACTGCATTTGAAGAGACTCACAATCATGACCTTATCCTACCTAAATATATACAATTTGTCCCCGCATATCGTGTAACGACCGAGGCCGACAAAGCACATGCCAACAGTCTGCATGATTATGGTGTGAGAACTTGCCATATAATGGGGTTCATGTTAAAGCAAAAGGGAGGACCAGGAAAAATTGGTTTTACAAAGAAGGATTTGTATAATCATTTCGACAAATCAAAGCGTGCTAAAGTGAAAGATGGTGATGCATATGCAGCATTGAGTTACTTGATTTCTAAGGCCGATGAGGATCCATTGTTGCAAGGAAAATTTACTCTGAAAGATAATAAACTTGAAAATTTAGTATGGGCTGACGGAGCTAGCATAATTGATTATCAATGTTTTAGTGATGTACTAGCATTTGACACAACATACCAGAAGAATAAATATAACAAGCCATTGGTTGTCTTCTCAGGAACTAACCATCACGGTCAGACATGCATATTTGGTTGTGGCTTGCTAGCAGATGAGAAGCATGAGACATATGTATTAGTTTTGAAGATTTTTCTTGAAATAATGGGTAATAAACATCCAATAGCAGTGGTGACAGATGGTAATCTTGCAATGAGAGGAGCAATTAGAGAGGTGATGCCAAATGCAACGCACCGACTTTGTGCGTGGCATTTACATCGCAATACGTGTGAAGCTATCAAAAATTCTGAGTTCCTTCATGGATTGAAGCACCTTATGTACCGGAATTTTTTTCCGGATGAGTTTGAAGATAAAGGGCATCGATTAGTATCAAAATTCAAGCTTTCTGAAAACGAATGGGTGAAAAAAACATATGAGATCAAAAGGATGTGGGCTTTTGCATATTTGAACAACACGTTTTTTGGTCGAATTAGGACTACGTCACAATGTGAAGGAATTCATTCGTTGATAAAGCACTATATTGGTAAAAAAATGTTATCTTTCGGATTTGATGCATAA 1452 0.3719 MGSVHKNSTKSSVEFDDLSFEYSGSSEENDISISQKKGTIDEAMKMVDPGDGFGEVEKKLTELTKDDIWGIEHDSVEQCVQFYKNYAKVHDFVARCDEKGYDFNDNLNMRQMVCNREGTRRKKYLEMENRKRDHRPITRVMCQARIRFHYDMKLRKWKVTAFEETHNHDLILPKYIQFVPAYRVTTEADKAHANSLHDYGVRTCHIMGFMLKQKGGPGKIGFTKKDLYNHFDKSKRAKVKDGDAYAALSYLISKADEDPLLQGKFTLKDNKLENLVWADGASIIDYQCFSDVLAFDTTYQKNKYNKPLVVFSGTNHHGQTCIFGCGLLADEKHETYVLVLKIFLEIMGNKHPIAVVTDGNLAMRGAIREVMPNATHRLCAWHLHRNTCEAIKNSEFLHGLKHLMYRNFFPDEFEDKGHRLVSKFKLSENEWVKKTYEIKRMWAFAYLNNTFFGRIRTTSQCEGIHSLIKHYIGKKMLSFGFDA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1551 483 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 477 IPR031052 GO:0006355
Ahy18g1551 483 Pfam FAR1 DNA-binding domain 81 170 IPR004330 -
Ahy18g1551 483 PANTHER OS02G0262500 PROTEIN 73 477 - -
Ahy18g1551 483 Pfam MULE transposase domain 292 386 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1551 Ahy-Chr18 34420392 34421843 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1551 MULE 3.20E-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1551 - - aip:107610854 1007.67