Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1547 ATGATCTCAGCATTACAACACCCTTGTCTTGTTAAACTTTATGGATGCTGTGTTGAGGGAGATCAACTATTGTTGGTATATGAATATATGGAAAACAATAGCCTTGCGTATGCATTATTCGGGCCCAAAGAGAATGAATTAAAATTGAATTGGCCAACGAGACAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTTTCTCCATGAGGAATCAAGATTGAAAATTGTTCATAGGGATATTAAGGCAACTAATGTGTTGCTCGACAAAAATTTAAATCCAAAAATTTCTGATTTTGGTTTAGCCAAACTCCATGAAGAGGATGCTACTCACATTAGTACTCGAATAGCTGGGACATATGGATATATGGCACCCGAATATGCAATGAATGGTTATTTGACTGATAAAGCAGATGTTTATAGTTTTGGAATTGTTGTCTTGGAACTTATTAGTGGAAAGGCTAATACCATTCATCGATCAAAGGAGGAAGTGTTATATCTTCTTGATTGGGCACATTTGTTGAAAGAGAAAGGCATGCTCATGGAGCTAGTTGATCGAAGGTTAGGTTCAGATTTCAATGAAGAGGAAGTAATGGTGATGATCCAAGTTGCTCTCTTATGCACCAATGCGACTGCAAATCTTAGGCCTTCCATGTCTTCAGTTCTAAGCATGCTTGAAGGCAAAACCATTGTTCCAGAATTTGTTTCAGATCAAAGTGAATTAATGGATGAGATGAAGTTAGAGGCAATGCGACAATATTACTATCAAAAGGAAGAAAATAAAATAAATGAGGCCAACAATAATGTGTCACATAATGTTGTTGAAGAACAATGGATTGCTTCATCTTCGTCTGACCTCTATCCTATGCACATTGATTCTTCATCATATTATTGGGAGCAAAGAAACTAG 909 0.3674 MISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLAYALFGPKENELKLNWPTRQKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLHEEDATHISTRIAGTYGYMAPEYAMNGYLTDKADVYSFGIVVLELISGKANTIHRSKEEVLYLLDWAHLLKEKGMLMELVDRRLGSDFNEEEVMVMIQVALLCTNATANLRPSMSSVLSMLEGKTIVPEFVSDQSELMDEMKLEAMRQYYYQKEENKINEANNNVSHNVVEEQWIASSSSDLYPMHIDSSSYYWEQRN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1547 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Ahy18g1547 302 Gene3D Transferase(Phosphotransferase) domain 1 31 242 - -
Ahy18g1547 302 Pfam Protein tyrosine and serine/threonine kinase 2 224 IPR001245 GO:0004672|GO:0006468
Ahy18g1547 302 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 261 - -
Ahy18g1547 302 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Ahy18g1547 302 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Ahy18g1547 302 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1547 302 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1547 302 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1547 Ahy-Chr18 34232001 34234176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1547 1 254 Receptor kinase-like Gene Family AT1G53420 67.829 1.42e-122 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1547 PK_Tyr_Ser-Thr 1.50E-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1547 - - gmx:100785451 488.804