Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1542 ATGAACATGATCTCCCCTTATTGTTTCTTCTTGCTTTTGCTTCTTGCTGCCTTTGGCTTTTACTCTCAAGGTTTTGGAGCTACCCAGCTGCCAGAAAATGAAGTGCAAGCTCTGCAAAGCATAGCAAAGACACTTGGGATCAATAATTGGAATCCTAGCGTTGATGAATGCAATAAGCGGCAGGGAAGAAACAATTGGAGTTCATGTTGGGAATTTAAAGATGATGAATATCAGAATGTTGTCATCTGCAATTGCTCCATTGACACTGTTTGTCATGTCACTAATTTATGTATGAAACGTCAAAATCTCCCGGGTACCCTGCCGCCTGAGCTAGTGAGATTGCCTTACCTTCAAGAAATTGATCTTACTTTAAACTACCTGAATGGCACAATTCCTAGAGAATGGGGCTCCTTGAATCTTCTCAACATTACTCTTGGAGGAAATCGGTTAACGGGTCCAATACCAAAAGAGATAGCCAACATATCCACACTCAAAAGTTTTGTTGCGGAGTCCAATCAACTGTACGGAGATCTTCCTCCTGAGCTTGGGAATCTGACCCAGATTCAAAGACTGATACTTTCCTCCAACAATTTTACGGGAGAGCTACCTGCAACACTTGCCAAGCTCACTAACTTGCAGGATATTCGACTTGGGGACAATCAATTCTCTGGAAAGATTCCTGATTTTATTGAAAGCTGGACAAATCTCAAAGCATTAAATATTATAGGGAGTGGACTAAGTGGACCAATTCCTTCTGGTATTTCAAAATTGAGAAACTTAACTGACTTGAGAATAAGTGATCTGAGTGGATCTGAAATTTCAAGTTTTCCGGATCTTAGTAATAAGTCGATGAAGTATCTGATTCTAAGGAACTGCAACATTCATGGAACACTAAAGGATTACCTCTCAACAACAGAAATATCACAAATCTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCACCTTCCTATAAGGAGCTTATAAAAGTGAATTACATATTCTTAACTGGAAATCTTCTCAACGGATCAGTGCCTTCATGGAAGAGTGATGCTACCAGCTTAGATCTTTCATATAACAACTTCAACAAAGATAATCAGCAGTGTCAATATGGAAAAGTGAACTTGTTTGCTGCTAGCTCTCCGACAATTAACAATTCAGGAATTGTTTCTTGTTTGAGAAGCTCTGTCTCTGTCAATTCTATCCACATAAATTGTGGAGGAACATCATCAGTAAAAGTGAAGGGAATCACATATGATGAAGATGGACGTGATGGGACAGCATTGTTCGACAGAGGTCAAAACAAAAACTGGGCAGTTAGCACCACCGGTGACTACATGGATGTAGAAGCAGAGTATTCTACTGCCTCTTTAAATGACACTTCTGCCCTCTCTTCCAATGATGCTTATCACCAACTATACAACGATGCACGAGTTTCTCCTATTTCTCTAACTTACTATGGATTTTGCCTTCATAATGGAAACTACAAAGTCAAGCTCCATTTTGCTGAGATCATGTTCACCAATGATCAAACCTATAAAAGCCTTGGAAGGCGTCTATTTCACATCTACATTCAGGGAACGTTGGTGGAGAAGGATTTTAATATTGCAAAAGAAGCAGGAGGTGTCGGTAAGGCAATCATAAAAGCTTACACAGCAGCTGTCATTAATAATACCATTGAGATTCGATTTTATTGGGCTGGAAAAGGGACAACCATAATCCCAAAGAAATCAGTGTATGGTCCTCTTATATCAGCCATATCTGTGGAGAATGAAAATGGAGGTAGCATATCAACAGGGGCTGTGATTGGAATTGTTGCTGCAGTGGTAATTATCATCATCATCTTAGTACTAAGTGTGCTTTGGTGGAAGGGCTACCTAGGAAACAAAAACTCTCCTTCAAGAGAATTTACAAGTTTAGATATCCAAACAAGTTTATTTTCTTTACGCCAAATCAAAATAGCAACAAATAATTTTGATATATCCAACAAGATTGGAGAAGGAGGATTTGGCCCCGTGTACAAGGGAGAGTTATCTAATGGTATAGTAATAGCAGTAAAGCAGCTTTCTTCAAAATCAAGGCAAGGGAATCGAGAGTTCTTAAATGAAATAGGCATGATTTCTGCTTTACAACATCCTTGTCTCGTTAAACTCTATGGATGCTGTGTTGAAGGAGATCAACTGTTGTTGGTATATGAATACATGCAAAATAATAGTCTTGCTCGTGCTTTATTTGGTCCAAAGGAACACCAAATAAAATTGGACTGGCCAACAAGACAGAACATTTGTATTGGTATTGCTAGAGGCTTAGCATACCTCCATGAAGAATCAAGATTGAAGATAGTTCATAGAGACATTAAAGCCACAAATGTCTTGCTTGATAGAGATCTTAATCCGAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAAGAGGACAATACCCATATTAGCACCCGAATAGCAGGAACATATGGATATATGGCTCCAGAATATGCAATACATGGTTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCTTTGGAAATCATTACTGGGAAGACTAATACTACTCTGCGGCAGAAAGAAGAAGTAATTTATCTGCTTGATCTGGCACGTTTGTTGAAAGAGAAAGGCAATCTAATGGAGCTAGTTGATAGAAGATTGGGCTCAAACTTTGATAAAGAGGAAGCCATGATAATGATTAAGGTGGCTCTCCTATGTACTAATGTGTCTGCAACACTTAGACCAAACATGTCTTCAGTGGTAAGTATGTTAGAAGGCAAAATTATAGTTCAAGAACCAATTTTTGATAAGCCAAGTGAGGCATTGGATGAGAAGAAATTGGAAGCAATGAGATTGTATTGTTTTGAAGATCAAAGTATTTCAACGGAGGATCCATGGACTACTTCGTCTACTTCTGCAAGAGATTTGTATCCATTAAATTTGGACTCTTCTTACTTAGAGAAGAGAGAATATCAAAATTATTAA 3006 0.3839 MNMISPYCFFLLLLLAAFGFYSQGFGATQLPENEVQALQSIAKTLGINNWNPSVDECNKRQGRNNWSSCWEFKDDEYQNVVICNCSIDTVCHVTNLCMKRQNLPGTLPPELVRLPYLQEIDLTLNYLNGTIPREWGSLNLLNITLGGNRLTGPIPKEIANISTLKSFVAESNQLYGDLPPELGNLTQIQRLILSSNNFTGELPATLAKLTNLQDIRLGDNQFSGKIPDFIESWTNLKALNIIGSGLSGPIPSGISKLRNLTDLRISDLSGSEISSFPDLSNKSMKYLILRNCNIHGTLKDYLSTTEISQILDLSFNKLTGPIPPSYKELIKVNYIFLTGNLLNGSVPSWKSDATSLDLSYNNFNKDNQQCQYGKVNLFAASSPTINNSGIVSCLRSSVSVNSIHINCGGTSSVKVKGITYDEDGRDGTALFDRGQNKNWAVSTTGDYMDVEAEYSTASLNDTSALSSNDAYHQLYNDARVSPISLTYYGFCLHNGNYKVKLHFAEIMFTNDQTYKSLGRRLFHIYIQGTLVEKDFNIAKEAGGVGKAIIKAYTAAVINNTIEIRFYWAGKGTTIIPKKSVYGPLISAISVENENGGSISTGAVIGIVAAVVIIIIILVLSVLWWKGYLGNKNSPSREFTSLDIQTSLFSLRQIKIATNNFDISNKIGEGGFGPVYKGELSNGIVIAVKQLSSKSRQGNREFLNEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMQNNSLARALFGPKEHQIKLDWPTRQNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAIHGYLTDKADVYSFGIVALEIITGKTNTTLRQKEEVIYLLDLARLLKEKGNLMELVDRRLGSNFDKEEAMIMIKVALLCTNVSATLRPNMSSVVSMLEGKIIVQEPIFDKPSEALDEKKLEAMRLYCFEDQSISTEDPWTTSSTSARDLYPLNLDSSYLEKREYQNY* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1542 1001 Gene3D Transferase(Phosphotransferase) domain 1 736 941 - -
Ahy18g1542 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Ahy18g1542 1001 Gene3D Ribonuclease Inhibitor 203 279 IPR032675 -
Ahy18g1542 1001 Gene3D Ribonuclease Inhibitor 49 202 IPR032675 -
Ahy18g1542 1001 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 81 952 - -
Ahy18g1542 1001 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 81 952 - -
Ahy18g1542 1001 Gene3D Ribonuclease Inhibitor 280 376 IPR032675 -
Ahy18g1542 1001 ProSiteProfiles Protein kinase domain profile. 660 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1542 1001 SMART serkin_6 660 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1542 1001 Gene3D - 401 594 - -
Ahy18g1542 1001 SUPERFAMILY Protein kinase-like (PK-like) 634 932 IPR011009 -
Ahy18g1542 1001 Pfam Malectin domain 402 588 IPR021720 -
Ahy18g1542 1001 Pfam Protein tyrosine and serine/threonine kinase 662 876 IPR001245 GO:0004672|GO:0006468
Ahy18g1542 1001 Gene3D Phosphorylase Kinase; domain 1 628 735 - -
Ahy18g1542 1001 SUPERFAMILY L domain-like 67 347 - -
Ahy18g1542 1001 CDD STKc_IRAK 666 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1542 Ahy-Chr18 33651311 33716029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1542 27 969 Receptor kinase-like Gene Family AT1G53420 55.010 0.0 994
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1542 PK_Tyr_Ser-Thr 4.00E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1542 - - gmx:732563 1259.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1542 18 33651311 33716029 Ahy7g2042 7 77399557 77413648 hybridization