Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1541 ATGAACATGATCTCCCCCTTTTCTCTCTTCTTCCTTTTACTTCTTGCTGCCTTTTGCTTTTCCTCTCAAGCTTTTGGAGCTACCCAGCTGCCAGAAAATGAAGTACAAGCTCTGCAAATCATAGCAAAGACACTTGGGATCAAGAATTGGAATCCTAGCGCTGATGAATGCAATAAGCTGGTGGGACAAAATAATTGGACTTCATGTTCGGAATTCAAAGATGATGAATATCAGAATGTTGTCATCTGCAATAATTGCTCCAGTGACACCGTTTGTCATGTCACTAATCTATGTATGAAACGACAAAATCTCGCGGGTACACTTCCGCCAGAACTAGTGAGGTTGCCTTACCTTCAAGAAATTGATCTTACTTTTAACTACCTGAATGGCACAATTCCTACGGAATGGGGCTCCATGAATCTTCTCAACATCTCTCTTGGAGGAAATCGGTTAACTGGCCCAATACCAAAAGAGATAGCCAACATATCCACTCTCCAAAATCTTGTTGTGGAGTCCAATCAAATGTATGGAGATCTTCCCCTTGAGCTTGGGAATCTGACGCAGATTCAAAGACTGTTACTTTCCTCCAACAATTTTACAGGAGAGCTACCTGCAACACTTGCCAAGCTCACTAACTTACAGGATATTCGATTTGGGGATAATCAATTCTCTGGAAAGATTCCTGATTTTATTGAGAGCTGGACAAGTCTCAAAATATTGAATATTATAGGGAGTGGACTAAGTGGGCCAATTCCTTCTGGTATTTCAAAATTGAGAAACTTAACTGACTTGAGAATAAGTGATTTGAGTGGATCTGAAATTTCAAGTTTTCCCGAACTTAGTACTAAGTCGATGAAATATCTGATTTTAAGGAGTTGCAACATTCATGGAACACTAGAGGATTATCTCTCAACAACGACAATATCACAAATCTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCACCTTCCTATAAGAAGCTGACAAAAGTGAATTACATATTCTTAACTGGAAACCTTCTCAATGGATCAGTGCCTTCATGGACGAGTGATGCTACCAGCTTAGATCTTTCATATAATAACTTCAACCAAGATAATCAGCAGCAATGTCAATCTGGAAAAGTGAACTTATTTGCTGCTACCTCTCCGACAATTAACAATTCAGGAATTGTTTCATGTTTGAGAAGCTCTGTCTCTGGTTGTTCTAAAGTTAACTCTATCCATATAAACTGTGGAGGAACATCGCTAAAAGTGAAGGGAATCACATATGATGTAGATACAGATGAAGGGACAGCATTGTTTACCAAAGGTCAAAATAGAAACTGGGCAATTAGTACCACCGGTGACTACACGGATGTAGAAAAAGAGTATTCTACTTTCTCATTGAATAACACTTCTGGCCTCGCTTTCAATGATGCTTATGGCCAACTATACAAAGATGCACGTGTTTCTCCTATTTCTCTAACGTACTATGGATTTTGCCTTCATAATGGAAACTACAAAGTCAAGCTCCATTTCGCCGAGATCATGTTCACCAATGATCAAACCTATAAAAGCCTTGGAAGGCGTCTATTTCACATCTACATTCAGGGAACATTGGTGGAAAAGGATTTTAATATTGCAAAAGAAGCAGGAGGTGTTGGTAAGGGAATCATAAAAACTTACACAGCAGCTGTCACTAATAATACCATTGAGATTCGATTTTATTGGGCTGGAAAAGGGACAACTACAATCCCACAGAAATCAGTGTACGGTCCTCTTATATCAGCCATATCTGTGGAGAATGAAAATGGAGGTAGCATATCAACAGGGGCTGTGATTGGAATTGTTGCTGCAGTGTTAATTATCATCATCATCTTAGTACTTAGTGTGCTTTGGTGGAAGGGATACCTAGGAAAGAAACACTCTCCTTCAAGAGAGCTTATGAGTTTAGATATACAAACAAGTTTATTTCCCCTAAGACAAATCAAAGCAGCAACAAATAATTTTGATATCACCAATAAAATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAAAGTTACCTAATGGTACAATAATCGCAGTGAAACAACTTTCTTCAAAATCAAGGCAAGGAAATCGTGAATTCTTAAATGAAATAGGTGTAATTTCTGCTTTACAACATCCTTGTCTTGTTAAACTCTACGGATGCTGTGTTGAAGGAGATCAATTATTATTGGTATACGAGTACATGGAAAACAATAGTCTTGCTCGTGCGTTATTTGGTCCAAAGGAACACCAAATACAATTGAATTGGCCAACAAGACAGAACATTTGTATTGGTATTGCTAGAGGCTTAGCATACCTCCATGAAGAATCGAGATTGAAGATAGTTCATAGAGATATTAAAGCCACAAATGTCTTGCTTGATAGAGATCTTAATCCAAAGATATCGGATTTTGGTTTGGCCAAACTTGATGAAGAAGACAATACCCACATTAGTACCCGAATAGCAGGAACATATGGATATATGGCTCCCGAATATGCAATGCATGGTTATCTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCTTTGGAAATCATTACTGGAAAGACTAATACAACTATGAGGCAAAAAGAAGATGTAATTTATCTGCTTGATTTGGCACGTTTATTGAAAGAGAAAGGCAATCTAATGGAATTAATTGATAGAAGATTGGGATCAAACTTTGATGAAAAGGAAGCCATGGTAATGATTAAGGTGGCTCTATTATGCACTAATGTGTCTCCAGCACTTAGACCAAACATGTCTTCAGTGGTAAGCATGTTAGAAGGAAAAACTATAGTTCAAGGACCAACTTTTGATGAGCAAAGTGAGGGATTGGATGAGAAGAAATTGGAGGCAATGAGATTGTATTGTTTTGAAGACCAAAGTATCTTAACAGAGGATCCATGGACTACTGCATCTACTTCTACAAAAGATTTGTATCCATTACATTTGGACTCTTCTTACTTAGAAAAGAGAAATCATTAG 3012 0.3801 MNMISPFSLFFLLLLAAFCFSSQAFGATQLPENEVQALQIIAKTLGIKNWNPSADECNKLVGQNNWTSCSEFKDDEYQNVVICNNCSSDTVCHVTNLCMKRQNLAGTLPPELVRLPYLQEIDLTFNYLNGTIPTEWGSMNLLNISLGGNRLTGPIPKEIANISTLQNLVVESNQMYGDLPLELGNLTQIQRLLLSSNNFTGELPATLAKLTNLQDIRFGDNQFSGKIPDFIESWTSLKILNIIGSGLSGPIPSGISKLRNLTDLRISDLSGSEISSFPELSTKSMKYLILRSCNIHGTLEDYLSTTTISQILDLSFNKLTGPIPPSYKKLTKVNYIFLTGNLLNGSVPSWTSDATSLDLSYNNFNQDNQQQCQSGKVNLFAATSPTINNSGIVSCLRSSVSGCSKVNSIHINCGGTSLKVKGITYDVDTDEGTALFTKGQNRNWAISTTGDYTDVEKEYSTFSLNNTSGLAFNDAYGQLYKDARVSPISLTYYGFCLHNGNYKVKLHFAEIMFTNDQTYKSLGRRLFHIYIQGTLVEKDFNIAKEAGGVGKGIIKTYTAAVTNNTIEIRFYWAGKGTTTIPQKSVYGPLISAISVENENGGSISTGAVIGIVAAVLIIIIILVLSVLWWKGYLGKKHSPSRELMSLDIQTSLFPLRQIKAATNNFDITNKIGEGGFGPVYKGKLPNGTIIAVKQLSSKSRQGNREFLNEIGVISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPKEHQIQLNWPTRQNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIITGKTNTTMRQKEDVIYLLDLARLLKEKGNLMELIDRRLGSNFDEKEAMVMIKVALLCTNVSPALRPNMSSVVSMLEGKTIVQGPTFDEQSEGLDEKKLEAMRLYCFEDQSILTEDPWTTASTSTKDLYPLHLDSSYLEKRNH* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1541 1003 SMART serkin_6 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1541 1003 Gene3D Transferase(Phosphotransferase) domain 1 741 948 - -
Ahy18g1541 1003 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 83 954 - -
Ahy18g1541 1003 Pfam Malectin domain 408 593 IPR021720 -
Ahy18g1541 1003 Pfam Protein kinase domain 667 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1541 1003 CDD STKc_IRAK 671 938 - -
Ahy18g1541 1003 Gene3D Phosphorylase Kinase; domain 1 633 740 - -
Ahy18g1541 1003 ProSiteProfiles Protein kinase domain profile. 665 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1541 1003 Gene3D Ribonuclease Inhibitor 197 264 IPR032675 -
Ahy18g1541 1003 Gene3D - 406 599 - -
Ahy18g1541 1003 SUPERFAMILY L domain-like 86 348 - -
Ahy18g1541 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Ahy18g1541 1003 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Ahy18g1541 1003 Gene3D Ribonuclease Inhibitor 267 390 IPR032675 -
Ahy18g1541 1003 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 954 - -
Ahy18g1541 1003 SUPERFAMILY Protein kinase-like (PK-like) 639 938 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1541 Ahy-Chr18 33386341 33410581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1541 27 962 Receptor kinase-like Gene Family AT1G53420 54.979 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1541 PK_Tyr_Ser-Thr 8.50E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1541 - - gmx:732563 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1541 18 33386341 33410581 Ahy18g1541 18 33386341 33410581 ECH
Ahy18g1541 18 33386341 33410581 Ahy7g2044 7 77465554 77478670 hybridization