Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1540 ATGATGAAGGTGGAGTTTGTTATGCCAACAAGCTCCAAAAACTTCAAAGCCTTCTTCATCATTGTGTTCCTTGCCTTCAATTGCTTCCAACAGTTTGGATCCTTCGCTCAACTCATACCACAAGATGAAGTGAAAGTGCTACAAACAATATCAGATAAAGTGAAGAACCTGAACTGGAAAGTAACACAAAATTCATGTAACGTTGACGGAGGATTTGGAAAACAAGAAGCCAATTCAGGGTCTCAAGTCCTTAGGAATATCACATGCAATTGCTCTTTCAATAGTAACACTCTTTGCCATGTTACAAACATTGTTCTCAAGGGTCACAACATTTCTGGAGCTATACCTGATGAATTTGGAAATCTAACTCATCTGGTGGAACTTGATTTAACTCGCAATTATTTCAATGGCTCAATTCCAAAGAGTCTTGCAAACATCCCACTTACTAATCTGTCACTCTTGGGAAATAATCTTAGTGGTCCAATTCCCGCTGAAATTGGTGACATTGCTACTTTGCTTGAACTGAACTTAGAAGATAATCAACTTGGAGGATCCCTTCCACGTAGCCTTGGAAATTTGAGCAAATTGGATCAATTACTTCTCTCTGGAAATAATTTTACAGGGGCAATCCCAGAAGAATTTGGCAAACTAAAGAATCTCACTGGGTTTAGGATAGATGGAAACAGTTTTTCTGGGAAGATACCAAACTTTTTTGGGAACTGGACCAAAATTACGAGAATGGATATGCAGGGAACATCCATGGAAGGCCCAATTCCTTCTGTTATATCTGAGTTAACAACTTTGCAAGAATTGAGAATAACTGATTTGAAGGGACCACCTATGACATTTCCTAATCTTACAGAGTTGAAGAGCTTGACCAGACTGGAATTAAGAAATTGCCCTCTCACTGGTCACATTCCACCCTATCTTGGTGAATTGCAACGTTTAAAAACTCTAGACCTGAGCTTCAACAGGTTGAATGGTTCTATCCCAGATTCACTTGAGAACTTGAAAGGACTAAATTACCTGTTCCTGACTAACAATTCTTTGACCGGAACAATTCCTTCATGGATACTAGGCAGCGACCAGGACATGGATTTATCTTACAACGATTTTACATCGCCTTCTCAACCTAGTTGCCAACTTCAGGATGTGAACCTAGCTTCCAGCTTCTCTTCCTCAGCGAGCACTTCAACTACATGCTTAAAGAGGGGCCTGCCATGTTCAGGAAAAGCAAACACTTATTCAATATTCATAAACTGTGGAGGATCTGAAATTGAGGCTGAGGGAACAAAATATGAAGCCGACGTCAGCAGAAGCGGCACTTCAAACTATCATAGTAGTAGCAGCAAGTGGGCTTACAGCAGCACAGGAGCATATCTAGGAGATACGGATGCTCCACATGTGGCAGCAAATGATTTCAATTTGAATATTAGTGGACCTGAATACTACCAAACTGCTCGCATTGCCCCTTTGTCTCTTAATTACTATGGCCTCTGTATGAAGAATGGAAATTATAAAGTGAAGCTTCATTTTGCTGAGATAATGTTTTCTAATGACCATACATTTAGCAGCCTTGGAAAGCGTATATTCGATGTTTCAGTCCAAGGTGTTAAATATTTGAAAGATTTTAACATTGCTGAAAAAGCTGGTGGAGCTGGTAAACCAATTACTGAGGAGTTTGATGTAGATGTTAATGATAATACCTTGGAGATACACTTGTCCTGGGCAGGGAAAGGAACTAATGCCATTCCTGTGAGAGGTGTATATGGACCTCTTATATCTGCCATAACTGTTACTCCAAACTTCAAAATTCCTTCGAATGGGCTGTCTACTGGAGCAATTGTCGGAATTGTGATCGGATCGTGCGCATTCGTCATACTGATACTATTTGTCCTTTGGAAGATGGGTTTCCTATGTGGGAAAGATCAAACAGACAAAGAACTTCTAGAGCTGAAAACAGGCTATTTCAGTTTAAGGCAAATTAAAGCTGCTACTAATAACTTTGACCCAGCAAACAAGATAGGTGAAGGAGGATTCGGGCCAGTATACAAGGGTGTACAGCCAGATGGTACTGTAATTGCAGTTAAGCAACTCTCGGCCAAATCAAAGCAAGGGAACCGCGAATTCGTCAATGAAATAGGCATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAGCTTTATGGTTGTTGCATTGAAGGACACCAATTGCTGCTAGTATATGAATACATGGAGAACAATAGTCTTGCTCGTGCCCTTTTCGGTAAACAAGAACAGAGGATACATTTGGATTGGCCCACAAGAATGAGGATCTGTGTTGGTATAGCAAGGGGTTTAGCTTATCTACATGAGGAATCAGTATTAAAAATAGTCCATAGGGATATTAAGGCAACCAATGTCTTACTTGATAAGAGTCTGAATGCTAAAATCTCTGACTTTGGTTTAGCCAAGCTTGATGAAGAAGAGAATACCCATATCAGCACAAGAATAGCTGGAACAATTGGTTACATGGCCCCAGAGTATGCTATGAGGGGTTACTTGACTGACAAAGCAGATGTCTATAGCTTTGGCATTGTGGCGTTGGAGATTGTTAGTGGGAAGAGCAACACAAACTACAGACCAAAAGAGGAGTTTGTTTATCTTCTGGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAGTTGGTTGATCCAAGTCTTGGTTCAAGCTACTCCCCTGAAGAAGCCATGAGAATGCTGCAGTTGGCACTCTTGTGCACCAACCCATCTCCTACTCTTAGACCACCCATGTCATCTATTATAAGTATGCTTGAAGGGAAGACTCCGATCCAAGCACCAATAATCAAGCGCAGCGAGGGTGCACAAGACGCAAGATTCAAGGCCTTTGAGATGCTGTCACACGACAGCGAAACAAATATTTCTTCTGCATTCTCACAATATAGCCAAGAGCAGAGGAGCAGATCCATGAATGGACCCTGGGTTGACTCCTCCATCTCTCTTACTAGTGGAGAAGATTATTCCTCAACCAATAACCTTATAAACGGTTCGGGCAATGTGTGA 3069 0.4125 MMKVEFVMPTSSKNFKAFFIIVFLAFNCFQQFGSFAQLIPQDEVKVLQTISDKVKNLNWKVTQNSCNVDGGFGKQEANSGSQVLRNITCNCSFNSNTLCHVTNIVLKGHNISGAIPDEFGNLTHLVELDLTRNYFNGSIPKSLANIPLTNLSLLGNNLSGPIPAEIGDIATLLELNLEDNQLGGSLPRSLGNLSKLDQLLLSGNNFTGAIPEEFGKLKNLTGFRIDGNSFSGKIPNFFGNWTKITRMDMQGTSMEGPIPSVISELTTLQELRITDLKGPPMTFPNLTELKSLTRLELRNCPLTGHIPPYLGELQRLKTLDLSFNRLNGSIPDSLENLKGLNYLFLTNNSLTGTIPSWILGSDQDMDLSYNDFTSPSQPSCQLQDVNLASSFSSSASTSTTCLKRGLPCSGKANTYSIFINCGGSEIEAEGTKYEADVSRSGTSNYHSSSSKWAYSSTGAYLGDTDAPHVAANDFNLNISGPEYYQTARIAPLSLNYYGLCMKNGNYKVKLHFAEIMFSNDHTFSSLGKRIFDVSVQGVKYLKDFNIAEKAGGAGKPITEEFDVDVNDNTLEIHLSWAGKGTNAIPVRGVYGPLISAITVTPNFKIPSNGLSTGAIVGIVIGSCAFVILILFVLWKMGFLCGKDQTDKELLELKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVQPDGTVIAVKQLSAKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGHQLLLVYEYMENNSLARALFGKQEQRIHLDWPTRMRICVGIARGLAYLHEESVLKIVHRDIKATNVLLDKSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSPEEAMRMLQLALLCTNPSPTLRPPMSSIISMLEGKTPIQAPIIKRSEGAQDARFKAFEMLSHDSETNISSAFSQYSQEQRSRSMNGPWVDSSISLTSGEDYSSTNNLINGSGNV* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1540 1022 PANTHER - 388 1004 - -
Ahy18g1540 1022 PANTHER - 79 300 - -
Ahy18g1540 1022 Gene3D Transferase(Phosphotransferase) domain 1 745 951 - -
Ahy18g1540 1022 CDD STKc_IRAK 675 942 - -
Ahy18g1540 1022 Pfam Malectin domain 417 597 IPR021720 -
Ahy18g1540 1022 Gene3D Ribonuclease Inhibitor 279 406 IPR032675 -
Ahy18g1540 1022 SUPERFAMILY L domain-like 88 377 - -
Ahy18g1540 1022 ProSiteProfiles Protein kinase domain profile. 669 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1540 1022 ProSiteProfiles Leucine-rich repeat profile. 315 338 IPR001611 GO:0005515
Ahy18g1540 1022 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 388 1004 - -
Ahy18g1540 1022 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 79 300 - -
Ahy18g1540 1022 Gene3D Phosphorylase Kinase; domain 1 638 744 - -
Ahy18g1540 1022 Gene3D Ribonuclease Inhibitor 44 172 IPR032675 -
Ahy18g1540 1022 Pfam Protein tyrosine and serine/threonine kinase 673 939 IPR001245 GO:0004672|GO:0006468
Ahy18g1540 1022 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 302 358 - -
Ahy18g1540 1022 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Ahy18g1540 1022 Gene3D - 411 602 - -
Ahy18g1540 1022 SUPERFAMILY Protein kinase-like (PK-like) 652 941 IPR011009 -
Ahy18g1540 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Ahy18g1540 1022 PANTHER - 302 358 - -
Ahy18g1540 1022 Gene3D Ribonuclease Inhibitor 173 278 IPR032675 -
Ahy18g1540 1022 SMART serkin_6 669 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1540 Ahy-Chr18 32975601 32984697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1540 16 1002 Receptor kinase-like Gene Family AT1G53440 61.562 0.0 1252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1540 PK_Tyr_Ser-Thr 5.40E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1540 - - adu:107459475 1895.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1540 18 32975601 32984697 Ahy18g1540 18 32975601 32984697 ECH
Ahy18g1540 18 32975601 32984697 Ahy7g2046 7 77525830 77534772 hybridization