Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1522 ATGATGATGTCGAGCTGCAGCATGGATGCTGGACCTGAGCAACTGTGCTACATACCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGCGTTCCATGCAGCAGCTTGTTCGACATGGTAACGGTTCGATGCGGTCACTGCACCAACCTCTGGTCCGTAAACATGGCTGCGGCCTTTCAATCACTGTCATGGCAAGATCTTCAGGGCCCTGGGCAGTGCAATCAGGAGTATAGGATTGACACAAATATTAATATGAATAATGGTGGCTCCTCTTCCAAATGCAACAATAGTAGTAGGCTTGCATCAATGCGTGCACCTACCAATCATGTTACTCAGGAAAGGGCTGTCAACCGCCCACCCGAGAAAAGGCAGCGCGTACCTTCTGCTTATAATCAGTTCATAAAGGAAGAGATCCAGAGGATTAAGGCTAATAATCCTGATATCAGTCACAGAGAAGCATTCAGTACTGCAGCAAAGAACTGGGCACATTTTCCTCGTATTCATTTTGGGCTAATGTTGGAGAGCAACAATCAAGCTAATAAGATGGATAATGCCTCTGAGAAGCATTTGATGTCAAGGGCTGCACCTGCACTGTTGAATAAATGA 606 0.462 MMMSSCSMDAGPEQLCYIPCNFCNIVLAVSVPCSSLFDMVTVRCGHCTNLWSVNMAAAFQSLSWQDLQGPGQCNQEYRIDTNINMNNGGSSSKCNNSSRLASMRAPTNHVTQERAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPRIHFGLMLESNNQANKMDNASEKHLMSRAAPALLNK* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1522 201 MobiDBLite consensus disorder prediction 103 122 - -
Ahy18g1522 201 Pfam YABBY protein 12 171 IPR006780 GO:0007275
Ahy18g1522 201 Gene3D High mobility group box domain 108 168 IPR036910 -
Ahy18g1522 201 PANTHER AXIAL REGULATOR YABBY 5 3 189 - -
Ahy18g1522 201 PANTHER PROTEIN YABBY 6-RELATED 3 189 IPR006780 GO:0007275
Ahy18g1522 201 SUPERFAMILY HMG-box 116 164 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1522 Ahy-Chr18 32214339 32217516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1522 13 179 C2C2-YABBY Transcription Factor Family AT2G26580 72.455 9.93e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Ahy18g1522 YABBY 9.70E-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1522 K25796 - gmx:100499942 336.265