Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1513 ATGGAGAATAATAACAGTGGGAGAAAGGAGGCAATAGAACAAGAGCTAATAAGAGGGCGTGACGTGGCAAAAGAGCTACTCGAAGTACTTATTATTCATAAATCCAATAGAAATGAAGAAGAAATTGAAAGGTCAATGGTGATGATGCCTTTTATTGAAGATGTTGTGCGCAAGATTCTCATATCATTCACAAACACCCTCTTGCTATTCAACAGCGACACCCAACATAACCGCTCTGATGAGGAGGGTAATCATATTCATCAAGGTTGCAAGAAAAGTAAGAGACCACCAACCCTATGTTACAAGAGAAAATCATTTGCACCAACTTGGAGTATCGATAATGCGATTCTATCAGAAGATGGGCTTGAATGGAGAAAGTATGGACAGAAAAAGACAAAGGACTGCAGATATATCAGGAGCTACTACAAGTGCAGTTACAAGAATGAAGAAGATTGCAAAGCCATCAAACGTGTTCAAAGAATCCAAGAGGATCCTCCATTATACCGTACAACCTATTATGGCCATCACACTTGCAAAAGCTCTTTTGTCAATTACCCTCACATGAAACTAGAATCTGCTCCTTCTTTAGAAGAGTCTTCTAAATTACTAAGTTTTAATAATAATTATTATAACAATAATACCCTCCAAAGCAAAGAGATGAAACACCTTTCATCATCAATTTCTTCTAAAAAACAAGAGCCTGTGGAAGTGATTATTCCTAATGATGACCATAATCAAATCCATCTTCTAAGTGACTGTGAGCTTGATTTCAATTATCATCCACCGAATCTGTTGAATTCGAGATTTTTATGGGATTATGGGAATGTTTGA 831 0.3694 MENNNSGRKEAIEQELIRGRDVAKELLEVLIIHKSNRNEEEIERSMVMMPFIEDVVRKILISFTNTLLLFNSDTQHNRSDEEGNHIHQGCKKSKRPPTLCYKRKSFAPTWSIDNAILSEDGLEWRKYGQKKTKDCRYIRSYYKCSYKNEEDCKAIKRVQRIQEDPPLYRTTYYGHHTCKSSFVNYPHMKLESAPSLEESSKLLSFNNNYYNNNTLQSKEMKHLSSSISSKKQEPVEVIIPNDDHNQIHLLSDCELDFNYHPPNLLNSRFLWDYGNV* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1513 276 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g1513 276 Pfam WRKY DNA -binding domain 119 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g1513 276 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 259 IPR044810 GO:0003700
Ahy18g1513 276 Gene3D WRKY domain 109 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g1513 276 SUPERFAMILY WRKY DNA-binding domain 112 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g1513 276 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 259 - -
Ahy18g1513 276 ProSiteProfiles WRKY domain profile. 113 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1513 Ahy-Chr18 31355791 31363312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1513 3 180 WRKY Transcription Factor Family AT3G56400 29.592 1.76e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy18g1513 WRKY 1.40E-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1513 - - aip:110265453 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1513 18 31355791 31363312 Ahy7g2058 7 77862967 77867833 hybridization