Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1507 ATGGAGAATCATCATCATTATTCATCGAAGGGAAGAAGGGAAATAATGGAGCAAGAGCTACTTAGAGGGCGTGACGTCGCAAATCAATTGCTTCAACTTCTTGTTCATAGATCCAATAATAATGATGAACAAGGGTTGACGTTGATCTTGCCATTTGCTGAAGATCTTGTGCACCAAGTGCTAAGATCATTCACAAACACCCTTTTGCTCTTGAACATTTCCAATAATAGTAATAATAATATTGATGATGCAATTTTTCCCATCAAAGATTTATCTTCTTCTTCTTCCCCATCAAGTTGCCAAAAGCATGAAAATTTAGATGAGGCTTGCAAAAGCTTCCACACAAATAATCGAAGAGGGCGCTACAAGAGAAAAACAACTGCACCAACTTGGGAGAAGGACAATCCAATTTTACTTGAAGATGGCCATGCATGGAGAAAGTACGGACAAAAGAAGACAATGAATTCGAAATACCTCAGGAACTACTACAGGTGCAGTCATAAGTGTGATGAGGGTTGCCCAGCAATGAAACAAGTTCAAAGAATTCAAGAGAATCCCCCATTATACCGAACTACCTATTATGGTCATCACACTTGCAAGAACACTAATTATTATAATAACGAGGAATCAATTATTTTGGAACATGAATCCAAATCTTCAATGTTCCTTAGCTTCAATAATAACAATAACAATATCATCCCAAGCAGCAAAAAACAAATTTTGAGATCAACAAAACAAGAGGCAGTGGAATTAGTGATTCATGATCATCACGATGACCATAGTGTTGCTACTCATCAGAGTCAATTATATGATCACTATGAAGTTGATTTAGAATATTCTAGGCATGTTGCTATGCTATCATCATCGTCATCACCATCTTGCACTGATGATACTACTGTTCATCAGTTTGACAATAATTATTATTATGATTTTGGATGGGACTTGGATTTTGATGGCATGGCATGTTTTGATCATCAAGATCAGATTACGATGATTATATAA 1002 0.3623 MENHHHYSSKGRREIMEQELLRGRDVANQLLQLLVHRSNNNDEQGLTLILPFAEDLVHQVLRSFTNTLLLLNISNNSNNNIDDAIFPIKDLSSSSSPSSCQKHENLDEACKSFHTNNRRGRYKRKTTAPTWEKDNPILLEDGHAWRKYGQKKTMNSKYLRNYYRCSHKCDEGCPAMKQVQRIQENPPLYRTTYYGHHTCKNTNYYNNEESIILEHESKSSMFLSFNNNNNNIIPSSKKQILRSTKQEAVELVIHDHHDDHSVATHQSQLYDHYEVDLEYSRHVAMLSSSSSPSCTDDTTVHQFDNNYYYDFGWDLDFDGMACFDHQDQITMII* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1507 333 ProSiteProfiles WRKY domain profile. 134 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g1507 333 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 291 - -
Ahy18g1507 333 SUPERFAMILY WRKY DNA-binding domain 136 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g1507 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 291 IPR044810 GO:0003700
Ahy18g1507 333 Pfam WRKY DNA -binding domain 140 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g1507 333 Gene3D WRKY domain 126 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy18g1507 333 SMART WRKY_cls 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1507 Ahy-Chr18 31148250 31151580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1507 8 203 WRKY Transcription Factor Family AT3G56400 35.122 4.78e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy18g1507 WRKY 3.20E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1507 - - aip:107610898 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1507 18 31148250 31151580 Ahy7g2059 7 78004454 78007982 hybridization