Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1489 ATGACCCCTTTGGCCTTCTCTCAATTCTATGAAAAATGGTTTGATCTTCTCCATCACCTTGTCAATGAGCTCTCCGACTTTGCTTCTTCCATCGCCAACTCCAAGGAAGAGTATATTTCTCCCTTGGTAGTGGCGAAGCAGGAAGAGAAGTTGGCCCAACTGATTGGCAAAGTGATGTTGCACCATGAGGAGTACTTCAGGGCGAAGTCACTCATCACGGAGAATGACCCCTTAAGCGTGGTGGCTTCTCCGTGGGCCACCACACTTGAGAGGTCTCTTAATTGGGTCACTGGGTGGAGACCTACTACGGCTTTTCACCTGGTGTACACGGAATCCTCTGTGTTGTTTGAGTCCCACATCGGAGATATTCTCCGTGGTGTGAATACCGGCGACCTTGGTGACCTTTCTCCAACGCAGTTCCGGCGAGTCAGTGAGTTGCAATGTGACACTGTGAAGGAAGAGAATCAAATAACAGATGAGCTTTCAGATTGGCAAGACACTGCGAGTGACTTGATGGGACCACGCGCCGAGAGCAAAGAGAGGATCGAACGGCTGGTATGCATCATCAAGAAAGCGGATGATCTACGGCTCAGAACGATGCGCAGCGTGGTTAGCTTGCTGTTGCCGCAGCAGGCGATTGAGTTCCTCATAGCGTCTGCAGAGATGCTCGTGGGAATCCGCGGGTGGGGATCGAATCACGACCGTCCATGTGGCAGATAA 720 0.5139 MTPLAFSQFYEKWFDLLHHLVNELSDFASSIANSKEEYISPLVVAKQEEKLAQLIGKVMLHHEEYFRAKSLITENDPLSVVASPWATTLERSLNWVTGWRPTTAFHLVYTESSVLFESHIGDILRGVNTGDLGDLSPTQFRRVSELQCDTVKEENQITDELSDWQDTASDLMGPRAESKERIERLVCIIKKADDLRLRTMRSVVSLLLPQQAIEFLIASAEMLVGIRGWGSNHDRPCGR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1489 239 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 5 237 - -
Ahy18g1489 239 PANTHER - 5 237 - -
Ahy18g1489 239 Pfam Seed dormancy control 46 110 IPR025422 GO:0006351|GO:0043565
Ahy18g1489 239 ProSiteProfiles DOG1 domain profile. 3 236 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1489 Ahy-Chr18 30210635 30213384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1489 50 236 Calmodulin-binding Proteins AT5G65210 24.752 2.48e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1489 - - adu:107459966 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1489 18 30210635 30213384 Ahy18g1489 18 30210635 30213384 ECH
Ahy18g1489 18 30210635 30213384 Ahy7g2080 7 78650161 78653147 hybridization