Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1459 ATGTCGCATCCGGGGAAGCCCGTTACCGAGTTGGATTCGGTCACTGACCGATTCCGTGACTCACTGAGTTGCGAGGCCGCCAGTCGAGACGCTAACAAGCCAGATTTCCGCGAACTCGATCTGGGCTCGCCAGTATCGCCGCTTCGTACGGCTCACCACGCAGTCGGCGCTGCTGGAAACGGAGGACCCGCCGCCAGTAGCAGCTCAAGCTCATCCGGATCCTTCTCGGGTCGAACCAACCCGGTTTCCAGAAGATCCGATTCGGGACACACCAACAGCAACGGCAACAACAACCACTCTGGCGAGCTTTCTGGTTCAAGTGAGAACAGCCCAACCGCAACCGGCGGCGGGAACACTCGGATCCTGAAACCGGGTCAAGCGAGATCTGATTCAATCTATTCAGGTCAGAACGGAGGCTCCTCCTCCTCTTCCTCCTCAGCCGTAAATTCGCCGCCGCTGAACGTCCTCCCCACCGGAAACATCTGTCCCTCCGGTAGGATCTTGAAGACAGGCATGGCGGCGAATCGGAGCTCGAGGAGCGACGTTTTGGGCTCCGGCATGGGGAATTACGGCCACGGAAGCATAATTCGCGGCGGCGGAAAGAGCGGCAGCAGCACGCCTGATTCGCCAGGGATCCCAAGCGTGCGGTCGAGCAGCGGCATTGGCGGCGAAGGCAATGTGGCGAAGAGGGGAGCGACGCAGGGTTCGGATCCGGAGGAGCTGAAGAGAGCTGGGAATGAGCATTACAAGAGGGGCCACTTCGCCGAGGCATTAGGGTTATATGATCGGGCAATTGCGCTTTCTCCGGCAAGTGCCGCCTACCGGAGCAACCGTGCCGCGGCCCTTACGGGTCTTGGGAGGCTAGGTGAGGCTGTGAGGGAGTGTGAAGAGGCTGTGAGGTTGGATCCTAATTATGGCAGGGCTCATCATCGCTTGGCATCTCTTTTCTTAAGGTTGGGGCAAGTTGAGAATGCAAGGAAGCACCTTTGTTACCCTGGGATGCATCTGGATCCGTGTGAGATGCACAAGTTGCAATTGGTTGAAAAGCATATTGCCAAATGCGGAGATGTAAGGAGGATTAGGGATTGGGAAAGTGTTGTTAGAGAAGTTGATGCTGCTATTGCTGCTGGAGCTGATTCTTCTCCTCAGCTCTTTATGTGTAGAGCAGAAGCACTGTTGAAGTTACACCAAATTGACGATGCAGAATCAATTTCGATACATGTACCCAAATCGGAGCCACTTACTATTTCCTCTTCTCAAGCTAAATTTTTTGGAATGCTTTCTGAAGCTTATGTGTATTTCGTCAGAGCTCAGATTGAGATGGCATTGGGAAGGTTTGAGAATGCAGTTAAAGCAGCCGAGAAAGCCAGTCAAATGGACCCCCGGAACGTTGAAGTTGCTGTTTTGGTCAACAATGTGAGGATGGTGGCGAGAGCTCGAGTGCGTGGCAATGATCTTTTCAAATCAGAAAGGTTTACCGAAGCTTGCTCCGCATATGGAGATGGTTTGAGGCTTGATCCTTCAAATTCGGTTCTATATTGCAACAGAGCAGCTTGTTGGTTTAAGCTTGGGCAATGGGAAAGATCAATTGAAGACTCCAATCATGCTTTGAAAATCCAACCTAACTACACTAAAGCTCTTCTTCGAAGGGCCGCATCAAACAGTAAGCTTGAAAGGTGGGAAGAGGCAGTCAAGGACTATGAGGTCTTGCGGAAAGAACTTCCAAATAACAATGAAGTTGCCGAAGCTCTTTTCCACGCACAAGTTGCATTGAAAAAATCTCGTGGGGAAGAAGTATATAATTTAAAATTCGGCGGTGAAGTGGAACAGGTGTCGGGTCTTGAGCAGTTTAGAGCTGCAATAACTTTACCAGGTGTTTCTGTTGTCCATTTTGAAATTGCATCTAACTCGCAATGCAAGCAAATATCGCCCTTTGTGGATACACTATGTGGTCGATATCCATCCATCAACTTCCTCAAGGTGGATATTCAAGAAAACCCAACCGTTGCAACTGCCGAGAATGTTAGGATCGTACCGACCTTCAAGATATACAAAAACGGCAGCCGAGTGAAGGAAATCGTGTGCCCCAGTCGCGATATGTTGGAACATTCCGTGAGGCATTACAGTTTTTAG 2133 0.5087 MSHPGKPVTELDSVTDRFRDSLSCEAASRDANKPDFRELDLGSPVSPLRTAHHAVGAAGNGGPAASSSSSSSGSFSGRTNPVSRRSDSGHTNSNGNNNHSGELSGSSENSPTATGGGNTRILKPGQARSDSIYSGQNGGSSSSSSSAVNSPPLNVLPTGNICPSGRILKTGMAANRSSRSDVLGSGMGNYGHGSIIRGGGKSGSSTPDSPGIPSVRSSSGIGGEGNVAKRGATQGSDPEELKRAGNEHYKRGHFAEALGLYDRAIALSPASAAYRSNRAAALTGLGRLGEAVRECEEAVRLDPNYGRAHHRLASLFLRLGQVENARKHLCYPGMHLDPCEMHKLQLVEKHIAKCGDVRRIRDWESVVREVDAAIAAGADSSPQLFMCRAEALLKLHQIDDAESISIHVPKSEPLTISSSQAKFFGMLSEAYVYFVRAQIEMALGRFENAVKAAEKASQMDPRNVEVAVLVNNVRMVARARVRGNDLFKSERFTEACSAYGDGLRLDPSNSVLYCNRAACWFKLGQWERSIEDSNHALKIQPNYTKALLRRAASNSKLERWEEAVKDYEVLRKELPNNNEVAEALFHAQVALKKSRGEEVYNLKFGGEVEQVSGLEQFRAAITLPGVSVVHFEIASNSQCKQISPFVDTLCGRYPSINFLKVDIQENPTVATAENVRIVPTFKIYKNGSRVKEIVCPSRDMLEHSVRHYSF* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1459 710 Pfam Tetratricopeptide repeat 244 304 - -
Ahy18g1459 710 ProSiteProfiles TPR repeat profile. 510 543 IPR019734 GO:0005515
Ahy18g1459 710 MobiDBLite consensus disorder prediction 25 160 - -
Ahy18g1459 710 Pfam Thioredoxin 617 701 IPR013766 -
Ahy18g1459 710 MobiDBLite consensus disorder prediction 199 221 - -
Ahy18g1459 710 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 11 708 - -
Ahy18g1459 710 Pfam Tetratricopeptide repeat 546 576 IPR019734 GO:0005515
Ahy18g1459 710 SUPERFAMILY TPR-like 237 466 IPR011990 GO:0005515
Ahy18g1459 710 MobiDBLite consensus disorder prediction 172 240 - -
Ahy18g1459 710 Gene3D Glutaredoxin 603 709 - -
Ahy18g1459 710 MobiDBLite consensus disorder prediction 62 119 - -
Ahy18g1459 710 SMART tpr_5 476 509 IPR019734 GO:0005515
Ahy18g1459 710 SMART tpr_5 238 271 IPR019734 GO:0005515
Ahy18g1459 710 SMART tpr_5 510 543 IPR019734 GO:0005515
Ahy18g1459 710 SMART tpr_5 430 463 IPR019734 GO:0005515
Ahy18g1459 710 SMART tpr_5 272 305 IPR019734 GO:0005515
Ahy18g1459 710 SMART tpr_5 544 577 IPR019734 GO:0005515
Ahy18g1459 710 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
Ahy18g1459 710 Gene3D Tetratricopeptide repeat domain 236 596 IPR011990 GO:0005515
Ahy18g1459 710 Coils Coil 436 456 - -
Ahy18g1459 710 ProSiteProfiles TPR repeat profile. 430 463 IPR019734 GO:0005515
Ahy18g1459 710 SUPERFAMILY Thioredoxin-like 513 708 IPR036249 -
Ahy18g1459 710 MobiDBLite consensus disorder prediction 129 157 - -
Ahy18g1459 710 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 11 708 IPR044534 -
Ahy18g1459 710 CDD TRX_family 615 702 - -
Ahy18g1459 710 Pfam Tetratricopeptide repeat 431 463 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1459 Ahy-Chr18 28649023 28652890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1459 475 620 U-box Gene Family AT3G07370 28.415 3.55e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1459 - - adu:107459775 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1459 18 28649023 28652890 Ahy18g1459 18 28649023 28652890 ECH
Ahy18g1459 18 28649023 28652890 Ahy7g2106 7 79098309 79102103 hybridization