Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1450 ATGATTCACAATGGAGTCTGTAACCTCCGCACCTGCCTCCGTCTCCCGGAGACCTCGCTTTCTCGATCACCACCGCTTTCCCTCGCTCTTCGCCGGCGATACCTTGCCGGCGCTTCCGCCGCCGCCAAGAAGGAGAAAGAGAAGGTGATAGTCATTTCCGGACCCACCGGTACCGGCAAGAGCCGCCTGGCTCTTGAGCTCGCCAAGCGCCTCAACGGGGAAATAGTCAGTGCCGACTCTATCCAGGTATATCGGGGTCTTGATATTGGATCTGCAAAGCCTTCCCAAAATGATAGAAAGGAGGTACCACATCATCTGGTTGACATACTGCATCCATCTGAAGACTATTCTGTTGGACAGTTTTTCGAGGATGCAAGGCAAGCTACAAGATCTATTCTTGACAAAGGGCGTGTTCCCATAGTTGTCGGGGGCACTGGACTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTATAGCTTCTCCGGAGATTGCATCCAAAGTACATCTAGAGTTGGCTGAACTACAGAGAAAAGAAGAATGGGATGCAGCTGTGCAATTGGTTGTAAAAGCCGGTGATCCGAAGGCCCAACTTTTACCAGTGAATGATTGGTATCGCTTACGGCGTAGCCTGGAAATTATTAAGTCCAGTGGGTCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGAAACAGGATGACTTTAGTGTTATTGATGGTTCTGAGTCATCTAGGGCAAACACAACAGAAGAAACCAATATGTCAGATTTGGACTACGAGTTTATGTGTTTTTTCCTTTCTGTCCAAAGACTTGACCTCTATAAATCACTTGATTATCGGTGTGAAGAAATGCTATTAGGGATGGGATTCTATCTGAGGCTCAGTGGCTTCTTAATTTGGGTCTTCTTCCAAATTCGAATTCTGCAACACGAGGAATTGGTTACAGACAAGAATTTTGCGAAGAGACAGCTGACATGGTTTCGAAATGAAAAAATATATGACTGGCTTGATGCTTCTAAACCTCTGGAAACAGTACTCAACTTCATTGTTGATTCATACCAGAACAGGAGCGGAAGGCTTGTTGTGCCCGAGAATCTAAGAATGCCACGAGATATTTCTAATCACCGAGAAGCTAATTTAATTAAGTCCTACAGAACCAGAAATAGGCATTTTTTGAAGCGGGAAGATTCTTCTCATATTCTGGACTGGATAGGGGAGACCCAAAGTGGGATACGAAGACTGGAAAATCCAAGAGAGGCAAATTACGAGAGAGTCTGA 1290 0.455 MIHNGVCNLRTCLRLPETSLSRSPPLSLALRRRYLAGASAAAKKEKEKVIVISGPTGTGKSRLALELAKRLNGEIVSADSIQVYRGLDIGSAKPSQNDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRSILDKGRVPIVVGGTGLYLRWFIYGKPDVPIASPEIASKVHLELAELQRKEEWDAAVQLVVKAGDPKAQLLPVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRKQDDFSVIDGSESSRANTTEETNMSDLDYEFMCFFLSVQRLDLYKSLDYRCEEMLLGMGFYLRLSGFLIWVFFQIRILQHEELVTDKNFAKRQLTWFRNEKIYDWLDASKPLETVLNFIVDSYQNRSGRLVVPENLRMPRDISNHREANLIKSYRTRNRHFLKREDSSHILDWIGETQSGIRRLENPREANYERV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1450 429 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 319 413 - -
Ahy18g1450 429 TIGRFAM miaA: tRNA dimethylallyltransferase 49 226 IPR018022 GO:0008033
Ahy18g1450 429 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 39 291 IPR039657 -
Ahy18g1450 429 Gene3D - 158 228 - -
Ahy18g1450 429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 208 IPR027417 -
Ahy18g1450 429 Hamap tRNA dimethylallyltransferase [miaA]. 49 351 IPR018022 GO:0008033
Ahy18g1450 429 Gene3D - 46 295 IPR027417 -
Ahy18g1450 429 Pfam IPP transferase 82 289 - -
Ahy18g1450 429 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 319 413 IPR039657 -
Ahy18g1450 429 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 39 291 - -
Ahy18g1450 429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1450 Ahy-Chr18 28101976 28108998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1450 52 278 C2H2 Transcription Factor Family AT2G27760 27.966 1.13e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1450 K00791 - gmx:100808814 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1450 18 28101976 28108998 Ahy18g1450 18 28101976 28108998 ECH
Ahy18g1450 18 28101976 28108998 Ahy7g2113 7 79313912 79320645 hybridization