Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1426 ATGGCACAGTTGCCTCCTAAAATACCAATAATACCCCAGAATTGGACGCCTTTTCACCTCCAAAGGGCACCACAACCACTATCAAATTCCACAATGTCAAGTTTCATCCCAAATTCAAATGCAACGGCAACGTCTAATAACAATTCTGCATCTTCAGTTCAACCACAGCAATTGTTGTCGTCATCGACAACGTCTTGGGTTGACGAGTTCCTCGACTTCTCGTCATCGCGGCGGGGCGCGCACCGCCGCTCCGCAAGCGACTCCGTGGCGTTCTTGGAGTCTCCCATGTTCTTTGACAGGCTGGACGATGACCAGCTCATGTCAATGTTCTCCGACGACGTTGCAGCTGTGGCGATGCAGCATCCGCCGCCGCTGTCGTCCGCATCCGATCCGTCATCGCCGTCGTCGGACCAGACGAGTAACAACGATGAGAAGCCAGCGGCAATGGCGCTGGACATTGCACCACCATTATTAATGCACGAACATAACGATAATCACGTGATGAAGCTTAAGAATGAAGCGGTTGAGGAGGAAAGCTTCGGCAAAAATGAGGAGGGGGCGGCCCCGTCCTCCTCTGCCACCGGCACCATTGAAACCATCGTTGATCCAAAGAGAGTCAAAAGAATTTTGGCTAATCGGCAATCAGCTCAGAGGTCAAGGGTGAGAAAGCTACAATACATTTCTGAACTTGAAAGGAGTGTAACAACATTGCAGACGGAGGTATCAGCATTGTCACCAAGGGTAGCATTTTTGGACCACCAACGTTTGATTCTTAATGTCGACAATAGTGCATTGAAGCAACGCATTGCTGCTTTGGCTCAAGACAAGATTTTCAAAGACGCTCATCAAGAAGCACTGAAGAAGGAAATAGAAAGACTTAGACAAATCTATCACCAGCAGCAGAACAACAACAACAACAATAATGGCCATTCATCTCTTCATACTCCAACCATGGCATGTAATAATAATATTAATAATGACAATAATAAGGAACAGCTCCTAAGTTGA 1008 0.4732 MAQLPPKIPIIPQNWTPFHLQRAPQPLSNSTMSSFIPNSNATATSNNNSASSVQPQQLLSSSTTSWVDEFLDFSSSRRGAHRRSASDSVAFLESPMFFDRLDDDQLMSMFSDDVAAVAMQHPPPLSSASDPSSPSSDQTSNNDEKPAAMALDIAPPLLMHEHNDNHVMKLKNEAVEEESFGKNEEGAAPSSSATGTIETIVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQQNNNNNNNGHSSLHTPTMACNNNINNDNNKEQLLS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1426 335 Coils Coil 283 303 - -
Ahy18g1426 335 MobiDBLite consensus disorder prediction 175 196 - -
Ahy18g1426 335 MobiDBLite consensus disorder prediction 29 56 - -
Ahy18g1426 335 Gene3D - 203 277 - -
Ahy18g1426 335 PANTHER BASIC LEUCINE ZIPPER 34 1 317 - -
Ahy18g1426 335 SUPERFAMILY Leucine zipper domain 204 258 IPR046347 GO:0003700|GO:0006355
Ahy18g1426 335 CDD bZIP_plant_RF2 205 255 IPR044759 GO:0003700|GO:0006355
Ahy18g1426 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 207 222 IPR004827 GO:0003700|GO:0006355
Ahy18g1426 335 Pfam bZIP transcription factor 204 248 IPR004827 GO:0003700|GO:0006355
Ahy18g1426 335 MobiDBLite consensus disorder prediction 301 335 - -
Ahy18g1426 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 254 IPR004827 GO:0003700|GO:0006355
Ahy18g1426 335 MobiDBLite consensus disorder prediction 120 143 - -
Ahy18g1426 335 SMART brlzneu 200 264 IPR004827 GO:0003700|GO:0006355
Ahy18g1426 335 PANTHER BASIC LEUCINE ZIPPER 2 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1426 Ahy-Chr18 27396365 27400751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1426 1 281 bZIP Transcription Factor Family AT3G58120 50.163 2.63e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy18g1426 bZIP_1 8.60E-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1426 - - gmx:100820197 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1426 18 27396365 27400751 Ahy18g1426 18 27396365 27400751 ECH
Ahy18g1426 18 27396365 27400751 Ahy7g2123 7 79580912 79585024 hybridization