Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1405 ATGCGATTGTCTTCTAAATCTGGTTCTTCATCTAAGCATAAGAATGTTGGTAAATCTAGTCCGTGGCTTCGGAAGAAGCACAAGAGGTTAGACGCGATATGTGAGAAGGAGTACAATCGGAACCATGGTGATTCCAATGGGTGTGATGATAATTTGATTACTGATGCTGCGGATTCAGCGGTTCGCCGAAGCTCCCGTGTTCGGCGTGCCCCGGTTCTGCTGGATGCCTCTCCTGCTCCTCCCAAGAAACGGCGGAAGTTAGGGAAGGTTGGAGTGCCTGCAGGGCGCATAGAGAGTGGCAAGAAGAATTTGGAGCAGCAGAGTCCCGGCAGCAGCATTGAGGGGAGTCCTTCGGCTTGGAGATCGAGGTTGAGGTCTAGGGCTAGGGGTGCAGGTTTTGAGGTCAATGATGAGAAGGAATTGCCCCGTCGGAAGAGGAAGCTTTTTGAGGATGTGGTTGTAAGTAGGGGTGATGATGAATTGAAGGTTGATAAGAAGAAGGAATTGGAAGGTGGAGTGCCAAGGATTGTTAAGTCAAAGAGACCAGCGAGGATCAAAGCTACAAAGCATGAAGAAGAGCTTAAAGTGAATGAGTCTCATGAAGTAGGGCCTAAGGAGAACGAATCTCATGAAGAGGGGCTGAGAGAGAATGAATCTCACACGGAAACGCTTAGAGAGAATGAATCTAATGAGGAAGAGCTTCAAGAGAATGAATCTTTTGTAGCAAAGCAGACAGAGAAGGAGTCTTATGAAGGGCATAGAGAGAATGAGTGTCATGGTAATTTAGATGAGAGCAACAGTCAAGAAGTGGAGCTTACAGTGAACAAAGAGGAGGGTAATGATACGGTTCCAGTAACTGATGTGTCTGGCGGGAGCCTTGTAATTATATTGGATGTGAATGAACCTCCTATTATACGGAATGGGGAGAGAAACATGTCAAACAATTTGCAAACGGAGGAATGTAGTGGCGGTAGTGAACAGTCTCCTTTGGAACATGCAGATAAACCGGATGATCGATCGGAACATGCAAATAAACAGGACGATCAGTTAGCATGTGAGAAGGAAGGCAATAATGCAAGTGAAGGAGCTGAAATTGCTGGGATTTCAACAAAGCAAGTAGAAAATGAAGGATCAGCTGACAAGGAGGTTGAGATTGATGAAAACACTTTGAAAGATGCAAACTATGTGACAAAGGATAAGCTGAAACAAGCTTCAAATGGCTCCCAACGGATCAAAGAGGGTCGACGGTGTGGATTGTGCGGGGGAGGCACTGATGGTAAGCCTCCTAAAAGGTTGCTTCAGGACAATGGTGAGAGTGAGAATGAAGCATATAGCGGTTCTTCGGCTTCAGAAGAGCCTAACTTTGATATCTGGGATGGTTTCAGTGATGAACCTGGCTGGCTTGGTCATCTCTTGGGTCCTATTAATGATAACTTCGGCATTGCTCGAATATGGGTTCATCAGCAATGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGGTTGGGATGCTTGAAGAATGTCAGGGCTGCACTTTACAGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCTCAGGTTGTCGTGTTGATCGTTGTCCAAAAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCACCGTAAATTTCTTATTGCCTGCACAGATCATCGGCATCTTTTCCAACCACATGGTAGTAAATATTTAGCCCGGATAAAGAAGTTGAAAGCTAGGAAACTGAAGTGGGATATGAGGAAGCATTCAAATGATGCTTGGAGAAAGGATATTGCTGCAGAAGAGAGATGGCTTGAAAATTGTGGAGAGGATGAGGAGTTTTTGAAACGTGAGAACAAGAGACTTCATCGTGATTTATTGAGAATAGCACCAGTGTACATTGGTGGTTCAGACTCTGCATGTGAACCATCCTTTCAGGGATGGGAATCTGTTGCTGGACTTAAAGATGTCATCCGGTGTATGAAGGAAGTTGTTATTTTGCCTCTACTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCCAGAGGTGTTCTTTTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTCCGGGCATTGATAGGTGCATGTGCCCGTGGCGATAGACGGATTGCATATTTTGCCCGCAAAGGTGCAGATTGCTTGGGGAAATACGTGGGCGATGCTGAGCGCCAACTAAGACTATTATTTCAGGTTGCTGAGAGATGTCAACCTTCTATAATATTCTTTGATGAGATAGATGGATTAGCACCTACCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTATCAACTTTGCTTGCTCTTATGGATGGTTTAAAATCCAGGGGTTCAGTTGTAGTCATAGGTGCAACAAACCGTCCTGATGCTGTTGACCCAGCACTGAGGCGACCTGGAAGATTTGATCGGGAAATTTATTTCCCACTGCCATCAACTGAGGACCGAGCTTCCATTCTGTCACTTCACACTCAGAGGTGGCCTAAACCAATTACTGGGTCCTTGCTTGAGTGGATTGCAAAAAAGACTCCTGGCTATGCTGGTGCAGATCTTCAGGCTCTCTGTACTCAAGCGGCTATCAATGCCTTGAAGAGGAATTTCCCGTTGCAAGAAGTTTTGTCCTTAGCTGAAGAAAAGCATTCTGGTTGGAAGAACCTTAGTCTACCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCATTTTTGCATTCCCCACTACCATGCTCCCGGAGAGAAGCAGGAAATGCCACTAATGATGTTGTATGCTCCCCTCTTCCTATCCACCTCATACCTTGTTTATTGGGGCCATTGTGCACACTTCTTGTATCTCTTGATGAAAATCTATGGTTGCCACCTCCTTTATCTAAAGCTGTAACAGTGATTAAGAATGAAGTGGTTTCTGTTCTAGACAAAAGGAAAATGCCTATTGATCACTGGTGGTTGCACATTGATGACTTACTGCAAGAAACAAATATTGCTTCTGAGATAAAGAGCAAGCTCATGTGTTTGGGCATTTTATCTGCAAATGATGGCTTTGGTGGTTCTCCTGATACTGCAGATGACACAGATGATAGCACTATGAAGTCTGATCCCTCCATAAAGAATCATTTGGGCATGCGTAGTGGTTTGTTTCTAGACAAGTCATTTGCATTTACTAATAAATCAGGATTTCGAATATTGATTTCTGGAAATCCCCGATCTGGCCAGAGACATCTTGCTTCCTGCTTTCTTTACTGCTTTGTGGGGAGTACTGAAATAAAGAAGATTGATATGGCAACCGCTTCACAAGAAGGGCATGGAGATGTAGTGCAAGGCATTGCACAAATATTATTGAAATGTGCTAGTCTTCAATCTTGCATATTATTCATGCCAAGAATTGATTTGTGGGCTGTAAACAAACATGTCCAAATCTATGATAAGGAAAGTGAGTTTAATACAGAGAAAAGCTCTGCAGAGATTACTGAAGGCAAGGCCAACAAGAAGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTATCGACGTCCTTGATGATTCTGGCTACTTCAGAAGTTTCGTATACAGAACTTCCAAGTAAGATAAGGGAATTCTTCAAGAGTTATCAATCTAAAGACAGCCAATCAACTCCTTTGCAGCAAACAATCCCTCGACTCTCACTGCATCTTGATAGTAATTTTGATAATGAGACGTTGATCACTCTGTCTGTAGAAGAGCTACTGAGAAATTTAGTTGAGCAGCAGATTCAATTGATTCATCAGAGCTCTCATGTTCATCTGGGTGTCCGAAAGGTTTCTGTTGAAGCTTGTGAAGAGAAGGTATGGCAGAGTAAAGATAATGGATCAGTTGATGAAGAGAAGAGTGAAACCCAAGTTCCTAAATCCACATCAGCGCCTCCACCACCACCACCACCCCCCGATGGTAGGTCTCTGAAGGAAAAGTCAACCTTGTCACTAGCAATATCCACATTTGGTTATCAAATTCTTCTATTCCCACATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCATGGAGGGGCTGGCCTTTTAATTCCTGTGTAATTCGTCCCAATAATTCACTAGACAAGTCAATGGTTCCTGGTAGCTCTGGTGGTGTTAAAAGCAAAGAAAGATCTGGTTTAGTTAGAGGCTTGATTGCCGTTGGTTTATTGGCTTACAGGGGTGTTTATAAATCAGCCAAGGAAGTTTCTCTTGATGTGAGGAAAGTTCTTGAGATCCTAATTGAGAATATCAATGCAAAAATTCAAGCTGGGAAAGACAGATATCAATATCTTCGCATTTTATCGCAAGTGGCTTATTTGGAAGATATAGTAAACAATTGGGCTTATGCGTTGCACAGTATGGATAAGGATTCCTTGGAGCCTATATCAAAAGTCATGTCGTCAACTGATGGGTTAAACAGTCATCTCTCGTGTGTAGATCACCAAGCTGAAACTAAGGATGTTCATATGAACGGTGATGATTCGGAGAACCCAGGGAGAAGTTGTAAGGAAATTCATGCTGAAACAACTGGATTTCCTGCCATGAATAAGAAAAATGATAATACAGATAAACTTGATCACGATGGTAGACATACAAATACAAGCTCTAAAGAATGTCTACCAAACGATTCTTTAAACAATCACTCTGATGACTCTGCTGCTGCAAACCAACCTGTTGATCCATCCCCAAATCAGGAGAATGGATTGCTATCCCGTGAGGTTGCCAATGGAGATGTCAGGATGTCAGAAGAATTAGGTAAATCCACATCCACTCATTCTGCTGTCCTTTCAGAGAATGGACTTCACACTGCCTTAGAACAAGAAGGTCTTAATGGAGGTACTGTAAGTACCATCTCTAATCAGCCCCCGACCTTGTCCACAGAAGGGACTGGTGTAACTGATGTTTACTCTCGCAAACATGAGAATGCTACAGGTATTGATATCTCTTCAAGTAAAGGCCATGAGCATGCTGAACCTGCGGTCGTTTGCATGTATCAATGTTGCCCTAGATGTCTTCACAGCTTATATCTTGCAATACGCAAGCTTCTCACCAGTGAGTTGAGCGATAACCATAGAACAGTAGAAGATGTCCATGATGCTGTTTCATCATTATCCGTGGATCTTATTTCAGCAATTAGAAAATGTCACATTGAAGATCTTGATTTTTCTAACAAAACCTTCAAAAGAGAAAGGCATGGAATAACTTTGAACTTGAGAACATGTGACCCCAAAAACCAAGACAAGGACTTTGTGGCAGCTGAGTGTGTTACTCACTCAACAAGCCAGGAGGCAACTGCAACCAAAGATGAGGTAGTGAATGAATCACTGAAGCTTGATTTAAAATTTATATTCAGAGATGGTGTGCTGGTTCCTATGAACCCAGACAAAGATGTTTCTCTTCATTGTAAATTTGAAACTCTGTGCCTTTGTTCTCTTAGAGAGTTGATAGTAATGACCAAGAGCCCTTTTGATTAA 5577 0.4314 MRLSSKSGSSSKHKNVGKSSPWLRKKHKRLDAICEKEYNRNHGDSNGCDDNLITDAADSAVRRSSRVRRAPVLLDASPAPPKKRRKLGKVGVPAGRIESGKKNLEQQSPGSSIEGSPSAWRSRLRSRARGAGFEVNDEKELPRRKRKLFEDVVVSRGDDELKVDKKKELEGGVPRIVKSKRPARIKATKHEEELKVNESHEVGPKENESHEEGLRENESHTETLRENESNEEELQENESFVAKQTEKESYEGHRENECHGNLDESNSQEVELTVNKEEGNDTVPVTDVSGGSLVIILDVNEPPIIRNGERNMSNNLQTEECSGGSEQSPLEHADKPDDRSEHANKQDDQLACEKEGNNASEGAEIAGISTKQVENEGSADKEVEIDENTLKDANYVTKDKLKQASNGSQRIKEGRRCGLCGGGTDGKPPKRLLQDNGESENEAYSGSSASEEPNFDIWDGFSDEPGWLGHLLGPINDNFGIARIWVHQQCAVWSPEVYFAGLGCLKNVRAALYRGRALKCTRCGRRGATSGCRVDRCPKTYHLPCARASGCIFDHRKFLIACTDHRHLFQPHGSKYLARIKKLKARKLKWDMRKHSNDAWRKDIAAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSACEPSFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPTRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQRWPKPITGSLLEWIAKKTPGYAGADLQALCTQAAINALKRNFPLQEVLSLAEEKHSGWKNLSLPSFAVEERDWLEAFLHSPLPCSRREAGNATNDVVCSPLPIHLIPCLLGPLCTLLVSLDENLWLPPPLSKAVTVIKNEVVSVLDKRKMPIDHWWLHIDDLLQETNIASEIKSKLMCLGILSANDGFGGSPDTADDTDDSTMKSDPSIKNHLGMRSGLFLDKSFAFTNKSGFRILISGNPRSGQRHLASCFLYCFVGSTEIKKIDMATASQEGHGDVVQGIAQILLKCASLQSCILFMPRIDLWAVNKHVQIYDKESEFNTEKSSAEITEGKANKKASHAWMSFIEQVESIGVSTSLMILATSEVSYTELPSKIREFFKSYQSKDSQSTPLQQTIPRLSLHLDSNFDNETLITLSVEELLRNLVEQQIQLIHQSSHVHLGVRKVSVEACEEKVWQSKDNGSVDEEKSETQVPKSTSAPPPPPPPPDGRSLKEKSTLSLAISTFGYQILLFPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCVIRPNNSLDKSMVPGSSGGVKSKERSGLVRGLIAVGLLAYRGVYKSAKEVSLDVRKVLEILIENINAKIQAGKDRYQYLRILSQVAYLEDIVNNWAYALHSMDKDSLEPISKVMSSTDGLNSHLSCVDHQAETKDVHMNGDDSENPGRSCKEIHAETTGFPAMNKKNDNTDKLDHDGRHTNTSSKECLPNDSLNNHSDDSAAANQPVDPSPNQENGLLSREVANGDVRMSEELGKSTSTHSAVLSENGLHTALEQEGLNGGTVSTISNQPPTLSTEGTGVTDVYSRKHENATGIDISSSKGHEHAEPAVVCMYQCCPRCLHSLYLAIRKLLTSELSDNHRTVEDVHDAVSSLSVDLISAIRKCHIEDLDFSNKTFKRERHGITLNLRTCDPKNQDKDFVAAECVTHSTSQEATATKDEVVNESLKLDLKFIFRDGVLVPMNPDKDVSLHCKFETLCLCSLRELIVMTKSPFD* 1859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 61 287 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 127 177 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 330 354 - -
Ahy18g1405 1858 SMART AAA_5 688 829 IPR003593 -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1298 1313 - -
Ahy18g1405 1858 Pfam AAA+ lid domain 853 885 IPR041569 -
Ahy18g1405 1858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 462 568 IPR013083 -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1317 1331 - -
Ahy18g1405 1858 Gene3D - 653 827 IPR027417 -
Ahy18g1405 1858 CDD AAA 686 827 - -
Ahy18g1405 1858 PANTHER AAA DOMAIN-CONTAINING 58 1854 IPR045199 -
Ahy18g1405 1858 Gene3D - 828 888 - -
Ahy18g1405 1858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 654 885 IPR027417 -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 185 276 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 101 119 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1 26 - -
Ahy18g1405 1858 Pfam PHD-like zinc-binding domain 487 566 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1542 1603 - -
Ahy18g1405 1858 ProSitePatterns AAA-protein family signature. 797 815 IPR003960 GO:0005524|GO:0016887
Ahy18g1405 1858 Coils Coil 217 237 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1 17 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 307 325 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1569 1603 - -
Ahy18g1405 1858 Pfam ATPase family associated with various cellular activities (AAA) 692 827 IPR003959 GO:0005524|GO:0016887
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1298 1335 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 1553 1568 - -
Ahy18g1405 1858 ProSiteProfiles Extended PHD (ePHD) domain profile. 428 566 IPR034732 -
Ahy18g1405 1858 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 58 1854 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 417 451 - -
Ahy18g1405 1858 MobiDBLite consensus disorder prediction 305 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1405 Ahy-Chr18 26822325 26829964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1405 654 889 Calmodulin-binding Proteins AT3G56690 41.176 8.37e-46 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1405 - - ahf:112772466 3665.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1405 18 26822325 26829964 Ahy18g1405 18 26822325 26829964 ECH
Ahy18g1405 18 26822325 26829964 Ahy8g2013 8 40210411 40218024 hybridization