Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1397 ATGACATCGAGTAGCAGCAAGGCGGAAGACCCGTGGAAATGGAACGTGGCGATGGTCGAGATGTTTTCGCAGGCGCAAACCGATTATGCAGACGAGGGGGAAGCCTTGTTTGACCTGGGCACTGACCGTGAAGTTGTGGTTGGAGATTTGGACTGCAATAATGAGGGGGCGTCGGTTGGATATGTAGATATGGGTGGGCTTAGATCGGAAGACGTTCTTCTAATGGAATTTAACACGCCTGAGGAGGCAAGAGGTTTCTATAATAACTATAGCCGCATTAAGGGGTTTGCAACAAGACAAGGAAAGAAGGTAAGAAATATTGTCGGAGACATTGTGAGGTATACTTTTGTCTGCAACAGAGAGGGGTTCAGAGAGAAGAAATGGTTGGAGAAGACTGATAGAAAGAGGGAGCATAAAGTGGTAACTCGCTGTGGTTGTGTGGCCGAGATGAGGATTAAGAGGAAAGACGGTTGCGGAAAGTGGTATGTCTCGCGATTTACCGATGAGCACAATCATGAGCTTCTGCCGGGAAAGTTTGTTGATTTCTTGAGATCACACAGGAAAATTTCAGAGGTTGAGATTGCTCATTTAACCAGCATGCGGGATATAGGAATTAGCATTCCGAAGATCTATGAATCGTTTGCAGCCCAGCTTGGTGGCTTCAACATGGTCACGTTTACGAAGCAAGATATGTATAACGAGGTGAGGAGACAAAGAGCATTGCAGGATGGAGATGTAAATGCGGCCATTCGGTTCCTAGATGGTGTTGGTCGTGTTGATGGGAAGATGTTTTGGAGGCATAGATTGGGTCCTGGACAACACTTGTGCGACTTGTTTTGGAGTGATGGGCGCAGTCAGTATGATTATGGGGTATTTGGTGATGTGCTGGCATTCGATGCGACCTACGGGAGGAACAAATATAATCTACCCGTAGTGGTATTTTCCGGGGTTAACCATCACAACCAGACGTGCGTATTTGCCACGGCTTTAGTGTCATGCGAGTCACAGGAATCTTATGTTTGGGTGCTTGAACAATTTTTGGAGTGCATGGGGGGTGTAGCACCTAAGTCGGTAATCACCGACGGGGATCCAGCAATGCGCATAGCTATTCAAAGGATTTTTCCTACTGCTCATCACCGGTTGTGCGCGTGGCATCTTCTTCGGAATGCGACGTCAAATATTTGTGACCCACGATTCACGCAACTTTTTAAGCATTGCATGTTGGCAGACATCGAGATAGACGAATTTGAGGTGATGTGGGAGGCAATGGTTGAGGAGTGTGGCGTGAGGGAGGTTGAATGGGTACAGGAGTTGTATAGGAAGAAGTATTCATGGGCAACTGCTTATATTAGAGGAAGATTCTTTGCGGGGATTAGAACAACTTCTCGGTGCGAGTCTTTGCATGCCAAACTGGGACGGTTTGTGGAAAGCAGGTATGGCGTGATTGAATTTGTGACGAACTTCCAGAGGTGTGTGGATTTTCTTAGAGACAATGAGGATGAGATGGAATTCCGTTCGTGCTACGGGACTCCGGTCTTGCAAACTCAGTTCATAGAGTTAGAGAAGTTTGGTGCGACACGATTCACGCGGGAGATGTTTTGGAGATATCGTGAGTCGCTAAATCGGTGTGTGCGGGTGAGGATAAACGCTTGTGTTGAGATAGAAGGTGGCCAAACTTTCACTGTCCAGAAGTACCGCAAACCAGGAATGACATGGCAGGTTAAGCACGAGAATACAACGAACACCTTCACGTGCTCCTGTCTGAGAATGGAGTCCTTTGGGCTCCCATGTGTACATATACTAGCTGTTCTGGTGCAGCTTGATGCTGTCGTTATTCCTGATACCCTCGTGCTGCGACGGTGGTCGAAGACAGCAAAGATCGACATGGATCTGGAGAAGTTCCGGTGTCCGTCTGGGGAACCGTCGACAATTTACCGTACTAGGTTGGGTGCATTCTCACAATTGTGTAAGAGGCTCGGAAGGGTTGCTTGCATGAGCGATGAGGACTTCAAGGACATTTCGCAGAAGGTTGTGAACGACACGTTATCTTTGGAAATGAAGTATGGACTTCGAGTGGACAATCCCGTGTCAAATGAACCGCAACGAGGAGGAGTTAAGGATCCAGTTCGTGTGAGAACCAAAGGGACTGGACGTGGCAATCAAGCGTCTCCATCAACCGGTAGGAAGCGACGGAAATGCAGCAGCTGCGGAGGATTGGGCCATCGAAGGACTAGGTGCCCAGGTGTGGGTGCATCAGGGACAACCGGCGTTGAACTTCATGAAGTGGCAGGCACTAGCGCCCAACCGGTTCCGGCAGATGATCCGCCGGAGCAGAGAAGGTCAGGAAAAAGGACATGCAACCTTTCGGAAACCTATCCCAGCTCCCATGATGAAGACACCAACCCATTGATTAATATTTATGACTGCTTGGTGGACAGCAACAGGAAGAAAAACAAAATTGTAAAAGAATGA 2472 0.4818 MTSSSSKAEDPWKWNVAMVEMFSQAQTDYADEGEALFDLGTDREVVVGDLDCNNEGASVGYVDMGGLRSEDVLLMEFNTPEEARGFYNNYSRIKGFATRQGKKVRNIVGDIVRYTFVCNREGFREKKWLEKTDRKREHKVVTRCGCVAEMRIKRKDGCGKWYVSRFTDEHNHELLPGKFVDFLRSHRKISEVEIAHLTSMRDIGISIPKIYESFAAQLGGFNMVTFTKQDMYNEVRRQRALQDGDVNAAIRFLDGVGRVDGKMFWRHRLGPGQHLCDLFWSDGRSQYDYGVFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFATALVSCESQESYVWVLEQFLECMGGVAPKSVITDGDPAMRIAIQRIFPTAHHRLCAWHLLRNATSNICDPRFTQLFKHCMLADIEIDEFEVMWEAMVEECGVREVEWVQELYRKKYSWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYGVIEFVTNFQRCVDFLRDNEDEMEFRSCYGTPVLQTQFIELEKFGATRFTREMFWRYRESLNRCVRVRINACVEIEGGQTFTVQKYRKPGMTWQVKHENTTNTFTCSCLRMESFGLPCVHILAVLVQLDAVVIPDTLVLRRWSKTAKIDMDLEKFRCPSGEPSTIYRTRLGAFSQLCKRLGRVACMSDEDFKDISQKVVNDTLSLEMKYGLRVDNPVSNEPQRGGVKDPVRVRTKGTGRGNQASPSTGRKRRKCSSCGGLGHRRTRCPGVGASGTTGVELHEVAGTSAQPVPADDPPEQRRSGKRTCNLSETYPSSHDEDTNPLINIYDCLVDSNRKKNKIVKE* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1397 823 MobiDBLite consensus disorder prediction 693 737 - -
Ahy18g1397 823 MobiDBLite consensus disorder prediction 763 803 - -
Ahy18g1397 823 MobiDBLite consensus disorder prediction 716 730 - -
Ahy18g1397 823 ProSiteProfiles Zinc finger SWIM-type profile. 570 608 IPR007527 GO:0008270
Ahy18g1397 823 PANTHER OS02G0262500 PROTEIN 71 628 - -
Ahy18g1397 823 SUPERFAMILY Retrovirus zinc finger-like domains 712 749 IPR036875 GO:0003676|GO:0008270
Ahy18g1397 823 Pfam MULE transposase domain 295 389 IPR018289 -
Ahy18g1397 823 Pfam FAR1 DNA-binding domain 86 176 IPR004330 -
Ahy18g1397 823 MobiDBLite consensus disorder prediction 785 801 - -
Ahy18g1397 823 Pfam SWIM zinc finger 584 604 IPR007527 GO:0008270
Ahy18g1397 823 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 628 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1397 Ahy-Chr18 26565417 26571687 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1397 MULE 3.80E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1397 - - aip:107620408 1102.43