Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1384 ATGGTGGGGTCAGGAGGTGGTGGTGGTGGAACAGGAGAGAGGAGCAAGGAGGCTGTTGGGATGATGGCACTTCATGAGGCACTCAGAACCGTCTGTCTTAACTCTGACTGGACCTACTCTGTCTTCTGGACCATCCGCCCACGCCCGAGAGTTAGAGGTGGCAATGGTTGCAAGGTTGGAGACGATAACGGCAGCCTGATGCTGATGTGGGAAGATGGGTTCTGCCGAGGAAGGAGTGCAAGTCTGGTGGAAGACATGGACGGAGGAGGAGAGGATCCAGTGAGAAAGGCCTTCAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGACCAGTTTGATTCTGGCATTCAGACTATTGCTGTAATTCAAGCTGGACATGGCCTTCTTCAGCTAGGCTCTTGCAAGATTATTCCGGAGGACCTCCATTTTGTGCTAAGAATGAGACACACATTTGAATCACTTGGATACCAATCCGGATTCTACCTCTCACAACTCTTCTCTTCAACAAGGAACACTTCATCTTCAACTTCAATCCCTTCAAAACCATCTTCCATTCCAATTAGGCCTCCAGCACCACTCTTCAACTGGCCTCACAGGCCATCGCTTCCATCTTCGGCCGCCTCAATGCTCTCCTCGCCCAATTTTGCTGCATCGAGGATGGGATTCCCAAACAAGGACTCTGAGACACACATGTTTCTCATGCCACACCATCACCACCATCACCAAGAGCATGGTGCAAGGATTGAGGACATGATTGGAACTAACACTACTAGTGGTGATCATGAGAATGATATCAAGTGGCCTAATGGATTGTCCTTCTTCAATGCTTTAACCGGCCGAACCGACGAAGCCAACAAGCTATTGCAGGAACAAGCATTGAACATCAGTCATCAGAACCCCAATTCGGATTCTTCAAGCATGCAACAAAATGCAAACCCAAATGAGTTCCTCAGCTTGGAAACAGGACACCCTGAAGGTGGTTCTGCTGCTGCAAGGAAAATGGATAAGTTCAAGAGGAGCTTCACTTTACCTGCAAGAGTTGTTTCATCATCTTCATCAACTTCAATGGATCAACATCAACAACAAGGTAATGCTGTGGAGTATAGGAATTCAGATGGAGCTATGTTTCCGGATGTTATGGAAACCTTTTTGGAGTGA 1287 0.4755 MVGSGGGGGGTGERSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRSASLVEDMDGGGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFDSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSIPSKPSSIPIRPPAPLFNWPHRPSLPSSAASMLSSPNFAASRMGFPNKDSETHMFLMPHHHHHHQEHGARIEDMIGTNTTSGDHENDIKWPNGLSFFNALTGRTDEANKLLQEQALNISHQNPNSDSSSMQQNANPNEFLSLETGHPEGGSAAARKMDKFKRSFTLPARVVSSSSSTSMDQHQQQGNAVEYRNSDGAMFPDVMETFLE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1384 428 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 24 194 IPR025610 -
Ahy18g1384 428 PANTHER GB|AAF34833.1 1 428 - -
Ahy18g1384 428 PANTHER GB|AAF34833.1 1 428 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1384 Ahy-Chr18 26089186 26091154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1384 25 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.034 1.85e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1384 - - aip:107614137 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1384 18 26089186 26091154 Ahy18g1384 18 26089186 26091154 ECH
Ahy18g1384 18 26089186 26091154 Ahy8g1999 8 39961421 39963941 hybridization