Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1372 ATGGTCATGGAGCTTCTTGATCATCATCGTAGGTCTATAATAATCTGCCTCTTGTTGTTGATTCTGTTCTCAAGACCGTTACAAGGGTACAAATTCTATGTTGGTGGGAAAGATGGTTGGGTTCTGAATCCTTCTGAGAGTTACAACCAATGGGCGGAAAGGAACAGGTTCCAAGTCAGTGACACATTGGTGTTTAAGTACAAGGAGGGATCAGAGTCAGTGTTGGAGGTGAAGAAAGAAGACTATGAGAAATGCAACAAAAAGAAGGCAATAAAGAAACTAGAGGGGGGAGATAGTAGTGAGTTCCAATTTGATAGGTCAGGTCCATTCTACTTCATTAGTGGGAATGATGATAATTGTGAGAAAGGTCAGAAGCTTATTGTTGTGGTGTTAGCTCAAAGACCACCACCACCACCTCCTCAAAATCCACCAAAATGTCCTCCTCCTTCACCAATTCATAATCCTCCTTATGTTACACCAACACCACCACAAGCACCTTCCCCTGTTCCACCATATGTTACCCCAACTCCACCACAAGCTCCTTCTCCCGGACATAACAATCATCATCCCAACCCTCCTTATACCCCAATAGTCCCCCCAAAAACACCTTCACCAACACCACCACAAGCTCCCTCCCCTGTCCCACCAAAAACGCCAATTATTCCACCAAAGGCACCATCACCACCATATGTTACTCCAACTCCACCGCAAGCTGCTCCTTCCCCTGGCCATAACAATCATTACCCTAACCCTCCATACACTCCAATAGTTCCACCACAAGCATCTCCTTCCCCCGGCCATAACAATCATCACCCTAACCCTCCATACACTCCAATAGTTCCACCACAAGCCGCTCCTTCCCCCGGCCATAACAATCATCATCCTAACCCTCCATACACTCCATATGTTCCAACACCAGGAACACCAAGATCATCACCTTCACCATATGTACCAACACCAATTTCTCAATCACCTTATCATACTCCATCCCCTGCTCATAACAATCATCATCCTAATCCTCCATATGTTCCATCACCAATTTCTCAAGCTCCTTCCCCTGGTACCAACAACAACCATTACCCAAACCCACCAAAAACACCATCACCACTTTCTCAGCCTCCCTATAGTGCTGCTGCTCCAACACCAACATCAGCACAACCACCATACAATACTTCCCCTGTTTCGCAACCTCCCACCGGCACTGGAACTGCACCCATAGGCTCACCACAGTACTCTCCAACAGCGCCATTACCTTCAGTTTCAACTCCATCACCGGCGTCTGCTACGCCATCACCTCCCTCACCGTCACCCTCCATTTCTCCATCCGCTGCGGCTCCTCTCACTTCCCCTGTTTCGCAACCACCCATAGGCTCACCACAGTACTCTCCAACAGCGCCATCACCGGCGTCTGCTACGCTATCACCACCCTCACCGTCACCCTCCATTTCTCCATCAACTGCGACTCCTCTCGCTTCTCCATCTTCCTCTCCAGGAGCAGCAACTCCTGCAGCCACGCCAGCGTCGTCTTCCAACGAAACGACACCAGCAACGCCAAACGGGAAACCTTCGTCGTCTGGATGGGCTGCAAATCCATCACCAGTTTCGGTTAATTCAGCCATCGCTATTTTCGTCGCTGCTGCACTAAGCACTATTATTGCCTAG 1662 0.4898 MVMELLDHHRRSIIICLLLLILFSRPLQGYKFYVGGKDGWVLNPSESYNQWAERNRFQVSDTLVFKYKEGSESVLEVKKEDYEKCNKKKAIKKLEGGDSSEFQFDRSGPFYFISGNDDNCEKGQKLIVVVLAQRPPPPPPQNPPKCPPPSPIHNPPYVTPTPPQAPSPVPPYVTPTPPQAPSPGHNNHHPNPPYTPIVPPKTPSPTPPQAPSPVPPKTPIIPPKAPSPPYVTPTPPQAAPSPGHNNHYPNPPYTPIVPPQASPSPGHNNHHPNPPYTPIVPPQAAPSPGHNNHHPNPPYTPYVPTPGTPRSSPSPYVPTPISQSPYHTPSPAHNNHHPNPPYVPSPISQAPSPGTNNNHYPNPPKTPSPLSQPPYSAAAPTPTSAQPPYNTSPVSQPPTGTGTAPIGSPQYSPTAPLPSVSTPSPASATPSPPSPSPSISPSAAAPLTSPVSQPPIGSPQYSPTAPSPASATLSPPSPSPSISPSTATPLASPSSSPGAATPAATPASSSNETTPATPNGKPSSSGWAANPSPVSVNSAIAIFVAAALSTIIA* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1372 553 PRINTS Proline rich extensin signature 135 151 - -
Ahy18g1372 553 PRINTS Proline rich extensin signature 159 171 - -
Ahy18g1372 553 PRINTS Proline rich extensin signature 171 192 - -
Ahy18g1372 553 PRINTS Proline rich extensin signature 192 208 - -
Ahy18g1372 553 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 334 348 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 133 531 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 484 531 - -
Ahy18g1372 553 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
Ahy18g1372 553 PANTHER EARLY NODULIN-LIKE PROTEIN 2 15 354 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 377 415 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 291 325 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 268 285 - -
Ahy18g1372 553 CDD OsENODL1_like 30 131 IPR041846 -
Ahy18g1372 553 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Ahy18g1372 553 MobiDBLite consensus disorder prediction 469 483 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 133 262 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 416 440 - -
Ahy18g1372 553 MobiDBLite consensus disorder prediction 357 376 - -
Ahy18g1372 553 PANTHER BLUE COPPER PROTEIN 15 354 IPR039391 GO:0009055
Ahy18g1372 553 Gene3D - 29 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1372 Ahy-Chr18 25633867 25636106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1372 15 205 Phytocyanin Superfamily AT5G53870 47.208 1.20e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1372 - - aip:107613132 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1372 18 25633867 25636106 Ahy18g1372 18 25633867 25636106 ECH
Ahy18g1372 18 25633867 25636106 Ahy8g1993 8 39820842 39823073 hybridization