Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1344 ATGTCCAAGGCAGAGAAAAGAGAGAGAGCAGAAATTACAATAAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGAATTGGAGGTTGGGGCATTAAAGGAATCAGTGGTGGTCAGAAGAGACGTGTGAGCATCTGCATTGAGATCCTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCTTCCTATTATGTCATGAAAAGAATTGCAAACCTTGTTCAGAAAGATGGCATTCAAAGAACCGTTATTGCTTCAATACATCAACCAAGCACTGAAGTCTTTCAACTTTTCCATAACCTTTGTCTTCTCTCTTCTGGTACAACTGTTTACTTTGGACCTGCCTCAACTGCTACTCAGTTTTTTGCTTCCAATGGTTTTCCATGTCCTGCACTCCAAAACCCTTCTGATCATTTACTGAAAACTATAAACAAGGATTTTGATCAGGATACTGACATGGGTTTATCTGGCACTAGAACAGTGCCTACAGAAGAAGCAATTAGAATCCTTATAAGCGCATATGAATCATCTGAAATTAACCAACAAGTTCAACAAGAAGTTGCAATGCTATCTAACCAGGAGACTAGATCAGTAGATCATAAGAAGAGAAGGCGTGCTGGTTTCCTTAATCAGTGCATTGTTCTTACCAAAATATCATGCGTGAACATGTTTCGTGATCTAGGCTATTATTGGTTACGTCTTGGAATATACATTGCATTGGCCATAGCCACTGCCACAGTTTTCTATGATCTAGGTACAAGTTTCAGCACAATTCAGGACAGAGGAGCACTTCTTATGTTTGAATCTTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAGGTCATGAAGGTATTTGAACGAGAAAGATTGAATGGGCATTATGGTGTTGTGGCATTTGTAATTGGGAACACAGTATCTAGTGTGCCGTACTTGGTTCTAGTATCAGTGATTCCAGGAGCCATAGCTTATTACCTTCCTCATCTTCAAAGAGGATTCGACCATTTTGTTTACTTCATATGTGTTCTGTTTTCTTGCCTCATGTTGGTTGAAAGCCTAATGATGATAGTTGCAAGCATAGTCCCAAACTATCTAATGGGAATCATAAGCGGCGCCGGAATCCAAGGAATCATGATGCTGGCCGGAGGGTTCTTCAGATTGCCCAATGATCTTCCCAAACCATTTTGGAGATACCCAATGTTCTATGTTGCATTTCATAGATTTGCATTCCAAGGATTGTACAAGAACGAATTTCAAGGGCTAAGCTTTGCAACAAATGATGGAAATGGCTCCTACATTAGTGGTGACCAGATTCTGAGGGACATGTGGCAAGTTGACATGAGTTACTCCAAGTGGGTCGATCTCGGAATCTTGCTTGGGATGATTTTGGTGTATCGAGTGTTGTTCTTCTTGATCATCAAGATTACGGAGAAGTTGAAGCCATTTTTTGTGTCATTCATTTCAGGGTCTCCCAAGCGAGAAACACTAGTGATGGAGAATAATGATGATAACTCTGCACTAAGTCATGAAGCATAA 1569 0.4073 MSKAEKRERAEITIREMGLQDAINTRIGGWGIKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIANLVQKDGIQRTVIASIHQPSTEVFQLFHNLCLLSSGTTVYFGPASTATQFFASNGFPCPALQNPSDHLLKTINKDFDQDTDMGLSGTRTVPTEEAIRILISAYESSEINQQVQQEVAMLSNQETRSVDHKKRRRAGFLNQCIVLTKISCVNMFRDLGYYWLRLGIYIALAIATATVFYDLGTSFSTIQDRGALLMFESSFITFMTIGGFPSFVEVMKVFERERLNGHYGVVAFVIGNTVSSVPYLVLVSVIPGAIAYYLPHLQRGFDHFVYFICVLFSCLMLVESLMMIVASIVPNYLMGIISGAGIQGIMMLAGGFFRLPNDLPKPFWRYPMFYVAFHRFAFQGLYKNEFQGLSFATNDGNGSYISGDQILRDMWQVDMSYSKWVDLGILLGMILVYRVLFFLIIKITEKLKPFFVSFISGSPKRETLVMENNDDNSALSHEA* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1344 522 Pfam ABC-2 type transporter 95 197 IPR043926 GO:0140359
Ahy18g1344 522 Pfam ABC-2 type transporter 218 429 IPR013525 GO:0016020|GO:0140359
Ahy18g1344 522 Gene3D - 1 160 IPR027417 -
Ahy18g1344 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 137 IPR027417 -
Ahy18g1344 522 Pfam ABC transporter 6 63 IPR003439 GO:0005524
Ahy18g1344 522 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 513 - -
Ahy18g1344 522 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1344 Ahy-Chr18 24730238 24734552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1344 19 99 Calmodulin-binding Proteins AT2G36910 37.037 3.42e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1344 K05681 - gmx:100813462 810.831