Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1334 ATGAAAGCAATAGTTGACCCTGATATTATAATTGGATATAACATCTGCAAATTTGACCTGCCATATCTTATTGAGAGAGCTCAAGCCTTGAAAATAGCAGAATTTCCTATTTTGGGCCGTATCAGGAACAGTAGGGTCCGAGTAAAGGATACAACTTTTTCATCTAGACAGTATGGAACCAGAGAAAGTAAAGAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTTATGCAAAGAGACTACAAATTAAGTTCTTATTCTTTGAATTCTGTTTCAGCACACTTTCTTTCTGAGCAGAAAGAGGATGTTCACCATTCTATCATATCTGATCTTCAGAATGGAAATGCAGAAACTAGGAGGCGCCTTGCTGTGTATTGTTTAAAGGTTCATATTTTGATTTGTTTCTCTCGTAGTATGCTTTGTGCAACTACCATTTGGTCTGCATTTTAG 459 0.3747 MKAIVDPDIIIGYNICKFDLPYLIERAQALKIAEFPILGRIRNSRVRVKDTTFSSRQYGTRESKEVAVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISDLQNGNAETRRRLAVYCLKVHILICFSRSMLCATTIWSAF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1334 152 Gene3D - 2 140 IPR036397 GO:0003676
Ahy18g1334 152 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 5 137 - -
Ahy18g1334 152 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 5 137 - -
Ahy18g1334 152 Pfam DNA polymerase family B, exonuclease domain 5 94 IPR006133 -
Ahy18g1334 152 SUPERFAMILY Ribonuclease H-like 5 131 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1334 Ahy-Chr18 24514512 24516012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1334 5 131 Core DNA Replication Machinery Family AT5G63960 83.465 4.26e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1334 K02327 - ahf:112769782 302.367