Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1328 ATGGCGGGGAAATCTCTAACCGGGTTTTGCTTCATCCTCCTCCTCCTCGTTGTTGCTCAGGAAATGGTGGTGCAAAGTGAGGCAGCAACGTGTGAGAACCTGGCGGATACCTACAGGGGACCATGCTTCACCACTGGAAGCTGCGACGACCACTGCAAGAACAAGGAGCACCTGCTCAGCGGCCGCTGCCGCGACGATTTCCGCTGTTGGTGCACCAGAAACTGTTAA 228 0.5614 MAGKSLTGFCFILLLLVVAQEMVVQSEAATCENLADTYRGPCFTTGSCDDHCKNKEHLLSGRCRDDFRCWCTRNC* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1328 75 PANTHER DEFENSIN 1 75 - -
Ahy18g1328 75 SMART gth_4 30 75 IPR003614 GO:0006952
Ahy18g1328 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Ahy18g1328 75 SUPERFAMILY Scorpion toxin-like 30 75 IPR036574 -
Ahy18g1328 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 75 - -
Ahy18g1328 75 Pfam Gamma-thionin family 30 75 - -
Ahy18g1328 75 Gene3D - 29 75 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1328 Ahy-Chr18 24410973 24411972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1328 11 75 Plant Defensins Gene Families AT2G02130 38.806 3.00e-09 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1328 - K20670 gmx:100779239 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1328 18 24410973 24411972 Ahy8g1969 8 39420895 39421652 hybridization