Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1296 ATGTACGGCAGAAAAGCTTGCGAGCTTGTCAAAGAATTTGCAAGCGTAGGTAAAGGCCAGCTCACACAGTACAATAGTGACCTCTTTGAACAAGTAGTTGCAGAATGCAGCCAGCATCACCTTGAGCTTCAATCTTTGATAAGAAAAATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGAAATGCTGACCACTATGGTGCCCTTATCCACCATCTCTCTTTAGTCCGCAATAAGCGCTGTCTAATGGCCTATGTAAATAACCGAGCTGAGATTATAAGAAGCTTGTTGTGGAAGATTGGCAGTGTGCTTCCTAAAGAGATTGAGGAGAAGCTTTCTCACACAGAGGAAGAGTATTTCAACAACTATTCTGGAGAATTGAAAAAATACATGTCAAAAATGGAGTTAGACCTGACAGTGGATATGGTGCCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATTGGAGATGGCATTGTGCTTAGCGATAAGACTGCCAATTTTGCTCGTCATTCGATCCACTTTCTGAAGCGAACTGATGCCGAACAATTCATTTCACGGGGTTTAATGGAGGAGCTCACAGGTTGA 597 0.4288 MYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTARNADHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLLWKIGSVLPKEIEEKLSHTEEEYFNNYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLSDKTANFARHSIHFLKRTDAEQFISRGLMEELTG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1296 198 Pfam GINS complex protein 43 116 IPR021151 -
Ahy18g1296 198 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Ahy18g1296 198 PANTHER PARTNER OF SLD5 1 194 IPR005339 GO:0000811|GO:0006260
Ahy18g1296 198 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Ahy18g1296 198 Gene3D - 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1296 Ahy-Chr18 23478677 23482725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1296 1 198 Core DNA Replication Machinery Family AT1G80190 68.159 1.19e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1296 K10732 - qsu:112021696 332.028