Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1284 ATGGAACGAGAGATGGTGGACATTGAATCTCAAACAAATCATCAAGAAGTGCCTAACAATGTCTTCCACAAGAGAAAAACTCCGGTGACTCTCAAGTTTGAAGATGTCGTGTACAAAATCAAGATTGAGAATGTTGGAATATTGGAGAAGAAGAAAAAGGCATCAGAACGCAAAGTGATATTGAATGGAGTGTCAGGAATTGTTCAACCGGGTGAGATCCTTGCAATGTTAGGTCCGTCAGGAAGTGGCAAGACAACACTGCTGACTGCATTGGGCGGCCGGCTCGGCGGCCGCCTCAAAGGAAAGATAACATACAATGGAGACCCCTTCAGCAATGCCATGAAGAGGAACACCGGCTTCGTCACGCAAGACGATGTCCTACACCCTCATTTGACAGTAACTGAAACCCTTGTTTTCACCGCTCTCCTCCGGCTACCTAACACGGTAGCCAAAGAGGAGAAGGTGGCATTGGCAAAAGCCGTCATGAACCAACTTGGATTGGTCAAGTGTAAGGACAGTATTGTTGGAGGCCCCGGCCTTCGAGGGGTTTCCGGTGGAGAAAGAAAAAGGGTTAGTGTTGGTCAAGAATTGCTCATAAACCCTAGTTTGTTGTTCCTTGATGAACCAACCTCGGGTTTGGATTCAACTACCGCCTTAAGACTTGTATCAACTTTGTTTGATCTTGCAAGAGGAGGAAGAACTATTGTGATGACAATACACCAACCTTCTAGTAGGTTGTACTATATGTTCACTAAGGTGTTGCTCCTTTCAGAAGGGAACACTGTTTATTTTGGAAAGGGTTCGGAGGCATTGGATTATTTCTCTGGTGTTGGATTTTCTCCAGCATTAGCCATGAACCCTGCTGATTTCCTTTTGGATCTTGCTAATGGGATATACACCAACGAATTGAACGAGGATGTTGTGGTGGACAAAAAACAATTGATTCAGGCATACAAGAGCTGTAACGCTGATTCCCAATTGAGGCAAATGGTTCAAGTAACGAATAGCAACTCATCAAGTAGAGTTGAGAACACAGCAGGGTTTGGAAAATGGCCTACAAATTGGTGGCAACAATTCACAGTGTTGTTGAGAAGAGACCTTAAAGAGAGAAAGCACGAGGCATTCGCTTCCTTCAATATTATTCAGGTCGTCTTGACTTCTTTCATTGTAGGACTATTGTGGTACAAGTCTGATACCGCACACATGCAAGATCAGCTTGGACTTCTATTCTTCTTATCAAGTTTCTGGGCATTTTATCCGCTGTACAGAGCAATCTTCGTGTTCCCAGATGAAAGAGTGATGTTGGAGAAAGAAAGATCTTCCGGAATGTACAGACTATCCTCATACTTCATGGCCAAGATGACGGTAGACCTTCCAATGGAACTCGTCCTCCCAACCGTTTCTATTCTCATAACCTACTGGATGGCAGGTCTGAAAGCTACCGCCGCCGCCTTCATCTTCATGCTCCTCACTATCCTCACCCTTGTGTTGGTCTCACAAGGCATAGGACTCGCTCTCGGCGCCTGTGTCCAGAACACCAAAGTGGCCACCACCTTCGCCTCCGTCATAGGGCTAACCTTCATGATAACAAGTGGATTCTTTGTCCAGAATGTTCCCAAATTCATAGCATGGTTGAAGTACATTTCTTTCATATATTACGCCAACGAACTCGTTATATTTTCTCAGTATCGTGAAGGTGAGACTTACAAATGTGGTACGGGTAAGTGCTTGATTTATGAGTACCCTGGAATCAAGGGTTTAGGGTTCGTTAATAATAGAGAGAGTCAATTAAGGGCTTCATTGATTTTGCTAGCAATGCTGTTTTTCTATAGGTTTATAGCTTATGTTGCTCTTATGAGAATTGGAGTCACAAAGAAATCAAAGTCTAGCTAG 1893 0.44 MEREMVDIESQTNHQEVPNNVFHKRKTPVTLKFEDVVYKIKIENVGILEKKKKASERKVILNGVSGIVQPGEILAMLGPSGSGKTTLLTALGGRLGGRLKGKITYNGDPFSNAMKRNTGFVTQDDVLHPHLTVTETLVFTALLRLPNTVAKEEKVALAKAVMNQLGLVKCKDSIVGGPGLRGVSGGERKRVSVGQELLINPSLLFLDEPTSGLDSTTALRLVSTLFDLARGGRTIVMTIHQPSSRLYYMFTKVLLLSEGNTVYFGKGSEALDYFSGVGFSPALAMNPADFLLDLANGIYTNELNEDVVVDKKQLIQAYKSCNADSQLRQMVQVTNSNSSSRVENTAGFGKWPTNWWQQFTVLLRRDLKERKHEAFASFNIIQVVLTSFIVGLLWYKSDTAHMQDQLGLLFFLSSFWAFYPLYRAIFVFPDERVMLEKERSSGMYRLSSYFMAKMTVDLPMELVLPTVSILITYWMAGLKATAAAFIFMLLTILTLVLVSQGIGLALGACVQNTKVATTFASVIGLTFMITSGFFVQNVPKFIAWLKYISFIYYANELVIFSQYREGETYKCGTGKCLIYEYPGIKGLGFVNNRESQLRASLILLAMLFFYRFIAYVALMRIGVTKKSKSS* 631
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1284 630 Gene3D - 40 276 IPR027417 -
Ahy18g1284 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 283 IPR003439 GO:0005524
Ahy18g1284 630 Pfam ABC-2 type transporter 357 562 IPR013525 GO:0016020|GO:0140359
Ahy18g1284 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 13 622 - -
Ahy18g1284 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 274 IPR027417 -
Ahy18g1284 630 Pfam ABC-2 type transporter 240 341 IPR043926 GO:0140359
Ahy18g1284 630 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Ahy18g1284 630 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Ahy18g1284 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 622 - -
Ahy18g1284 630 SMART AAA_5 70 260 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy18g1284 Ahy-Chr18 23079185 23083853 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1284 60 244 Calmodulin-binding Proteins AT2G36910 31.414 2.31e-13 71.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1284 K05681 - gmx:100816135 786.949
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1284 18 23079185 23083853 Ahy18g1284 18 23079185 23083853 ECH
Ahy18g1284 18 23079185 23083853 Ahy8g1942 8 38940815 38945628 hybridization