Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1278 ATGGTGAAATTTGGCTCCTATTCGTTCCTATTCTGCGCTCTTACATTGGCATTGGATATACTGGGGCTGCTTGTGATTGGAACAAAAGCAGATCCTTATGACTTTACCAAGAACAGGAAGTCTGATAGTGAGTCAGATTTGGATGATGGCAGCACGTCAGAGTTGTCAGGTCATTGGACTGATGGTTGGAGCACCAATTCGGGAGATGGGGATGACTTGAACGGGTTGGAGGAACCGCTGACTAAGGAAGGGGATAGTGGCCATTCCGACAGTGAATACGACGGTAGGGATGGTGGTGGAAGCTATATGCATGCTGCTGCAGAGGATCCTGCAAACTCCGAGAATGTCATGGGTAAACAATTCAGTTGTCCAGACCCTGTGATTGCTTCCGTGTTGTTATCTGCAGAATTTAATGGGATTGGAGATGCGTATGCAAGCTATGTCGCGTATGCAAAGGGAATTAGCTTTGCAGTGCGAAAGGGAGATTCTATTAAAGACGAGGAGGGGAATATTGTTAGGAAGTTTTTCCTCTGCAATCGGCAAGGGCTGCGTGAAAAGAAGCATTACGAGCGAGTTGATAGAAAAAGGACTCATAAACCGGAGACGAGAACGAATTGCAATGCCAAGCTTGTGGTGTTTCTGGACAAAAGTTGTAGGAAATGGCGGACGAAAACATTGGTCGAGGAACATAATCACGAATTGGTGCCCCAGGAGTTCACTAATGTCATGGCTCCACATAGGAAGATCCTAGAAGGGGACAAAGCGCATATACATAGCATGCATGAAGCTGGGTTCAAAACAACTCAAATAATGGGCTTCTTTGCCCACATGTGTGGTGGATATCGGAATCTTAACTTCATTAGTAAGGACTTGTATAATTATATGGATGGAGTTAGGCAATCAAGGATTGTCGAGGGAGATACAGCCGCAGCAATAAGCTATTTGAAGGGCAAGGCTGAGTTGGATCCGATGGCAGTTGTACAGTACTCTTATTACGCTGAGAAGCACCTTGGGCACCTATTTTGGTCATATGGTAACATGCAGCATGACTATGAATGCTTTGGTGATGTGTTAGCATTTGACTCAACGTACAGAAAAAACTTATATAACAGACCTCTTGTGATCTTTTCTGGCACCAACCATCATAGACAGACAATTATTTTTGGGTTTGATTTGCTAGAGGACGAGAAGATTCCGTCCTACAAATGGTTGTTAAGTAGCTTCTTGGAGGTAATGAGGCACAAGGAGCCGAAAGTCGTTGTCACAGATGGCGATGAATCCATGCGAGAAGCCATTAGATGTGAATTCCCTAGTGCGACACATAGACTATGCACCTGGCATCTTGCTCAAAATGCAGTTGTTAATATTAAAGACAAAGATTTTTGTGCTGCGTTTAAGACTGCTGTGTATGGTCACTTTGATATGGAAGAATTTGACAGATATTGGGTAGACATGATCACGTCATTCGGTTTAGAGGACAACGATTAG 1488 0.4402 MVKFGSYSFLFCALTLALDILGLLVIGTKADPYDFTKNRKSDSESDLDDGSTSELSGHWTDGWSTNSGDGDDLNGLEEPLTKEGDSGHSDSEYDGRDGGGSYMHAAAEDPANSENVMGKQFSCPDPVIASVLLSAEFNGIGDAYASYVAYAKGISFAVRKGDSIKDEEGNIVRKFFLCNRQGLREKKHYERVDRKRTHKPETRTNCNAKLVVFLDKSCRKWRTKTLVEEHNHELVPQEFTNVMAPHRKILEGDKAHIHSMHEAGFKTTQIMGFFAHMCGGYRNLNFISKDLYNYMDGVRQSRIVEGDTAAAISYLKGKAELDPMAVVQYSYYAEKHLGHLFWSYGNMQHDYECFGDVLAFDSTYRKNLYNRPLVIFSGTNHHRQTIIFGFDLLEDEKIPSYKWLLSSFLEVMRHKEPKVVVTDGDESMREAIRCEFPSATHRLCTWHLAQNAVVNIKDKDFCAAFKTAVYGHFDMEEFDRYWVDMITSFGLEDND* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1278 495 MobiDBLite consensus disorder prediction 50 71 - -
Ahy18g1278 495 MobiDBLite consensus disorder prediction 35 106 - -
Ahy18g1278 495 Pfam MULE transposase domain 357 451 IPR018289 -
Ahy18g1278 495 Pfam FAR1 DNA-binding domain 147 236 IPR004330 -
Ahy18g1278 495 PANTHER OS02G0262500 PROTEIN 132 486 - -
Ahy18g1278 495 MobiDBLite consensus disorder prediction 75 97 - -
Ahy18g1278 495 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 486 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1278 Ahy-Chr18 22793356 22795446 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1278 MULE 1.40E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1278 - - aip:107610720 1025