Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1242 ATGATAGCTACTAATAGTATGAAACTCACACAAGTACCACCCCACACCTTCCTACTCCCCCACCTCTCCAATTATTTGTGTCTTCTTCTGTTCTGCTTCAAACTTGAAATACCCAAAACACCCCCTCCATCCCCACCCTCCTTCAAAATACGTGCTTCTCACACATCCACACACCTCACAACAATACCAACAACCCTTCCTCCTTCTCTCTTCTCTCTCTCTCTTTCCATGGCCAATGAACTAACTCACAACTCACGTGCTTCACACATGCACGTTCACTACGACGACGACGACGACAGCGACGACTCAGGCGACCAAGAAGAAGGCGTGAACACTTCTGACGACAGCGACGATGACAACGACAACGAAGAAAGCCAGCTGGACGAGAAGGTGGGGGTGACAGGTGATGAGCGGCGGAGAGGGTGGTTGTTACGGCGGGGGAAATGGGCGGAGGAGTGGAACAGGGTGCTGGTGCTGGTGTCGGCGATGGGTCTGTTCGTGGACCCATTGGTGTTGTACGCGGTGTCAATAAGCGAGACATGCATGTGCGTGTTCGTTGATGGGTGGTTGGCGATAACGGTGACGGTGCTGCGGTGCATGACGGACACGTTGCACATCTGGAACATGTGGTTGCAGTTAAAGATGGCAAAAGCTTCGCTTCTTGGCACCACTTCTTCTTCTTCTTTAAATTCTCTTCGCTTCAGAAAGGCAAAGTGGGCTCTCTTCTTTAACCTCTTTCTCATTCTCCCTCTACCCCAGATGGTGCTATGGGAAGTAATCCCTTCTTTGTTGGAGGAAGGATCAATAACAGTGGCAATGACAGTGTTGTTAATGATGTTCCTATTTCAATACCTTCCCAAAATTTATCACTCGGTTTGCCTCTTGCGTCGCATGCAAACCCTCACTGGCTTCGTTTTTGGGACCGTTTGGTGGGGCATTGCCCTCAACTTGATCGCATATTTTGTCGCTTCTCATGCAGCAGGGGCATGTTGGTACTTGCTGGGGGTGCAGAGGGCAGCAAAGTGCCTAAAAGAGCAGTGTAGAAAGACAGCTGGTTGTGGAGTGAGAAGCTTATCTTGCAAGCAGCATATATATTATGGAAGCAATGGGATGGTGAAGGAGAAACCAAGGTTGGCTTGGGCAGCAAATAGGGAAGCAAGGTCAACATGCCTTGATGGCCCTGACAACTATGACTATGGTGCTTATCAATGGACTGTTCAACTTGTCACCAATGATAGCCGCTTGGAAAAGATCCTCTTCCCTATCTTCTGGGGCCTCATGACTCTCAGCACATTTGGGAGCCTAGAGAGCACAACAGAATGGCTTGAAGTTGTTTTCAACATTATTGTATTAACTAGTGGCCTTCTTCTCGTCACTATGTTGATTGGAAACATTAAGGTGTTTTTGCATGCTACAACATCAAAGAAGCAAGCAATGCAACTGAAGATGAGGAATATTGAGTGGTGGATGAGCAAGAGGCGGCTGCCACAAGGGTTTAGGCAGCGTGTGCGCAACTACGAGAGGCAGCGCTGGGCTGCTACGCGTGGAGTTGACGAATGCCAGATGATCAAAAACCTCCCTGAGGGGCTGAGGAGGGACATTAAGTACCATCTCTGTTTGGATTTGGTTAGACAGGTACCACTATTTCAGCATATGGATGATCTGGTCTTAGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCACAAAGGGAGAAACGATCACTAGAGAGGGAGATCCAGTTCAAAGAATGCTATTTGTCGTAAGGGGCCACCTTCAAAGTAGCCAAGTCCTAAGAGATGGGGTGAAGAGTTGTTGCATGCTAGGGCCAGGGAACTTCAGCGGCGACGAACTCCTCTCTTGGTGTCTAAGGAGGCCGTTCATCGAGCGCCTGCCGCCGTCCTCATCCACATTGGTCACGCTAGAAACCACCGAGGCATTCGGCCTTGAAGCCGAGGATGTAAAGTATGTGACACAACATTTTAGGTATACTTTTGTGAAGGAAAAAGTGAAAAGGAGCGCGAGGTATTACTCGCCAGGGTGGAGAACTTGGGCTGCCGTGGCTATTCAATTGGCTTGGAAAAGGTACCGGCATCGGTTGACTTTGACTTCTTTGTCCTTTATTAGGCCTAGAAGGCCTGTGTCAAGGTGCTCTTCCTTGGAAGAGGATAGGCTTCGGCTCTATACGGCCATGTTAACTTCACCAAAGCCTAATCAAGAGGATTTTGACGTTTCATAA 2241 0.4873 MIATNSMKLTQVPPHTFLLPHLSNYLCLLLFCFKLEIPKTPPPSPPSFKIRASHTSTHLTTIPTTLPPSLFSLSLSMANELTHNSRASHMHVHYDDDDDSDDSGDQEEGVNTSDDSDDDNDNEESQLDEKVGVTGDERRRGWLLRRGKWAEEWNRVLVLVSAMGLFVDPLVLYAVSISETCMCVFVDGWLAITVTVLRCMTDTLHIWNMWLQLKMAKASLLGTTSSSSLNSLRFRKAKWALFFNLFLILPLPQMVLWEVIPSLLEEGSITVAMTVLLMMFLFQYLPKIYHSVCLLRRMQTLTGFVFGTVWWGIALNLIAYFVASHAAGACWYLLGVQRAAKCLKEQCRKTAGCGVRSLSCKQHIYYGSNGMVKEKPRLAWAANREARSTCLDGPDNYDYGAYQWTVQLVTNDSRLEKILFPIFWGLMTLSTFGSLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGFRQRVRNYERQRWAATRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWKRYRHRLTLTSLSFIRPRRPVSRCSSLEEDRLRLYTAMLTSPKPNQEDFDVS* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1242 746 MobiDBLite consensus disorder prediction 98 125 - -
Ahy18g1242 746 Pfam Cyclic nucleotide-binding domain 568 656 IPR000595 -
Ahy18g1242 746 Gene3D Jelly Rolls 546 664 IPR014710 -
Ahy18g1242 746 ProSiteProfiles cAMP/cGMP binding motif profile. 548 658 IPR000595 -
Ahy18g1242 746 SUPERFAMILY cAMP-binding domain-like 474 662 IPR018490 -
Ahy18g1242 746 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 88 742 - -
Ahy18g1242 746 MobiDBLite consensus disorder prediction 91 132 - -
Ahy18g1242 746 SUPERFAMILY Voltage-gated potassium channels 147 469 - -
Ahy18g1242 746 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 88 742 - -
Ahy18g1242 746 CDD CAP_ED 548 654 IPR000595 -
Ahy18g1242 746 Gene3D Helix hairpin bin 473 539 - -
Ahy18g1242 746 SMART cnmp_10 548 677 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1242 Ahy-Chr18 21496646 21503889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1242 130 744 Ion Channels AT5G54250 75.117 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1242 K05391 - zju:107430493 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1242 18 21496646 21503889 Ahy18g1242 18 21496646 21503889 ECH
Ahy18g1242 18 21496646 21503889 Ahy8g1909 8 38295621 38302318 hybridization