Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1225 ATGGCTACTACTACTTCATTTCTGCATCTTATGGTTACTGATAACAACAACAACAACAACCATGAAGATCAACAACCCATGATGGATAACAATCCTGTTCTCAGTGAGGAAACAACAAGAACAAGGAGTTCTAATGAACATGGAGGAAGAATCATCAGATCAGGAAGGAATAAAGGTGCTCGTGTCAAACCAAAGAAACCGCCACAAAGAGGCTTAGGTGTTGAACAGCTTGAAAGGTTAAGAATGCAAGAGTGTTGGAAGAAGATGATGATGATGAACGACTCTTCATCTTCATCTTCTTCTTCACCCTCATCTTCATCTTCCTCTGGGGTTGTTCTTCCAACAACAACTTCGACAACTGCTGACTATTATCATCATCATCATAATCATCATCACTACCCTAACATGGTAGCTACTTTTGGTGGTAACAATGGTGGTGTTACTATGAAGTATGGTGCTTCTGCAGCACCATCAGCACCAAGAAGCCATGTCCATGGTGGTGGGTTTCAATTCATCCCTCAACAAGTTTTTCATGGAAGTGCTGTTGGTCATTTCATGGGGAATAATAGGAGTGGCTTTAGTGGCGGTTCTTCTTCTTCTTCTTCTTGTTCCTCGTTTGGATCTGTGGCAATGGCGCCAGTTTTTAACCCTTTGCTTGGAACCCCTTTGGTTGAGACCTCGAGATCAGAGCTCACTTCAATACCAAATCTTCACCACCATTCTCACCTTCATCAACCTCTTGATTTTTGCCTTAAGAAAACAAGGTTCAATAATGAGGAGAATGTGAATGGATCAAAAGCAAGGAAGGAGAACTCTTTGATTATATGGAACAATGGTCCTAATTTTGTTGGATATGAAGCCCCAAACCTTGATGATGGGGAAGAAGTCACTGAGATTATTAAGAATGATGAAGCTGGTGCTGATGAGGGTGTGGAAGTTGTTGCTGTTCACAGGAAGGGAAACTCAGTGTGTGGCAGAGTTTTCATGGAATATGAGTTTTTCCCAGGAAAAGATGGCAGAGGCACTTCTTCCAAGGAGCTGGAATTTCCCACAATTGCTGCTGCTGAAGCTGAAGCTTCCCCTATCACTGTTCCTCCTCCTCCTACTTCTACACCCTATAGAAAACTTCCTCCTCCTTCTTCCAATTCCAACACCAACAACAACATTGATTTGTCTCTCAAGCTTTCTCGCTAG 1194 0.4246 MATTTSFLHLMVTDNNNNNNHEDQQPMMDNNPVLSEETTRTRSSNEHGGRIIRSGRNKGARVKPKKPPQRGLGVEQLERLRMQECWKKMMMMNDSSSSSSSSPSSSSSSGVVLPTTTSTTADYYHHHHNHHHYPNMVATFGGNNGGVTMKYGASAAPSAPRSHVHGGGFQFIPQQVFHGSAVGHFMGNNRSGFSGGSSSSSSCSSFGSVAMAPVFNPLLGTPLVETSRSELTSIPNLHHHSHLHQPLDFCLKKTRFNNEENVNGSKARKENSLIIWNNGPNFVGYEAPNLDDGEEVTEIIKNDEAGADEGVEVVAVHRKGNSVCGRVFMEYEFFPGKDGRGTSSKELEFPTIAAAEAEASPITVPPPPTSTPYRKLPPPSSNSNTNNNIDLSLKLSR* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1225 397 MobiDBLite consensus disorder prediction 356 397 - -
Ahy18g1225 397 MobiDBLite consensus disorder prediction 376 397 - -
Ahy18g1225 397 PANTHER OS01G0212500 PROTEIN 1 396 IPR040356 GO:0003700
Ahy18g1225 397 MobiDBLite consensus disorder prediction 13 39 - -
Ahy18g1225 397 PANTHER PROTEIN SPOROCYTELESS 1 396 IPR014855 GO:0003700
Ahy18g1225 397 MobiDBLite consensus disorder prediction 361 375 - -
Ahy18g1225 397 MobiDBLite consensus disorder prediction 13 77 - -
Ahy18g1225 397 MobiDBLite consensus disorder prediction 93 114 - -
Ahy18g1225 397 Pfam Plant transcription factor NOZZLE 8 114 IPR014855 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1225 Ahy-Chr18 20922927 20924756 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Ahy18g1225 NOZZLE 4.10E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1225 - - aip:107610694 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1225 18 20922927 20924756 Ahy8g1901 8 38092380 38093867 hybridization