Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1219 ATGGAAGAGGGGAATGAGTGTTTGTGCGCGCTGTGTGGGAAGAGCGCTCAGATGCTGTGCGAGTCAGACCAGGCTAAGCTATGCTGGGACTGCGATCGCACCGTTCACGGCGCCAACTTCCTTGTCGCCAAGCACGTCAGAGTGCTCCTCTGCCGCCACTGCCACCGCCCTACTCCCTGGAAGGCTTCTGGTCCCTCCCTCACCGTAACCTCCTCTCTCTGCCACCCTTGCTCTTCTTCTTCTTCTCTTCCCATCACCACCGCCATTCATGATCATGAATCTGAAGACGATGAATCTGAGGATGATGAAGACGAGGAAGAGGAAGAGGAAGAGGAAGATGAATATGAAGCAGAGGAGGAGGAGGGGGAGAATCAGGTGGTGCCTTTGTCTTCCGCTTCCGGCGGCGGTGGTGGTAATACTAATGGCTACGATGACGGAGACATGTCTAGCAACACTGCTTCTTCTTTTCGATTCAACAACTTGAAGCGCTTTCAACATAATAATCATCACAACATCCACCATTCTTCTATTTCTGATGAAGATGACGACGATGTAGGTTGTTGCTCGTCTGAAAGATTAGGAGGAGATAACGATGATGAAGATTATATGAGGCCATTCAAGCACCGTAGAATCTTCAATCACAGGGATGATATACATTGCCACAATCATAGACGGTGA 678 0.5 MEEGNECLCALCGKSAQMLCESDQAKLCWDCDRTVHGANFLVAKHVRVLLCRHCHRPTPWKASGPSLTVTSSLCHPCSSSSSLPITTAIHDHESEDDESEDDEDEEEEEEEEDEYEAEEEEGENQVVPLSSASGGGGGNTNGYDDGDMSSNTASSFRFNNLKRFQHNNHHNIHHSSISDEDDDDVGCCSSERLGGDNDDEDYMRPFKHRRIFNHRDDIHCHNHRR* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1219 225 MobiDBLite consensus disorder prediction 172 200 - -
Ahy18g1219 225 Coils Coil 89 125 - -
Ahy18g1219 225 CDD Bbox1_BBX-like 8 50 - -
Ahy18g1219 225 Pfam B-box zinc finger 8 47 IPR000315 GO:0008270
Ahy18g1219 225 PANTHER OS08G0178800 PROTEIN 9 194 - -
Ahy18g1219 225 SMART bboxneu5 4 50 IPR000315 GO:0008270
Ahy18g1219 225 MobiDBLite consensus disorder prediction 91 151 - -
Ahy18g1219 225 MobiDBLite consensus disorder prediction 126 151 - -
Ahy18g1219 225 MobiDBLite consensus disorder prediction 94 123 - -
Ahy18g1219 225 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 9 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1219 Ahy-Chr18 20866777 20868208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1219 9 77 C2C2-CO-like Transcription Factor Family AT5G54470 65.217 1.98e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1219 - - aip:107614151 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1219 18 20866777 20868208 Ahy18g1219 18 20866777 20868208 ECH