Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1213 ATGTCACGTGTCAGAGCCAAATATGAAAGTTCAAAGTTAGAGTCAGTTTGTTTGATTGCGATTGCATCTGTGACCAAGCAAATGATGTCCCGAGAAAGAGACAAATTCCTCAATAGCGCTTCCAGACTTAATGAATCGTTTTATGGTATCACCGTTTATATTATTAACTATGATTTTTCAATCAAATTTACACTACCCAGTACCTGCCCTTTAAGCAAAAACATGAGAAGCCTTGTGTCACTTTTTATGACTTCTCTTTTCGCTTCATTCTTATCAAGCTTCTCAGCTCTAGACATTCTTACTACACATAAACTCATCAAAGATGGTGACAAGTTAGTTTCCGCAAGAGGGACCTTTGAACTGGGATTCTTCAGCCCTGGTAACTCCAGAAACCGATATTTGGGAATATGGTACGTGGCTTCACCTAGAACTCCTATATGGGTAGCAAATAGAGAAGCTCCTATTAGAGATGGTTCAGGAATTCTCAGGATCACTGAGGGGGGTATCCTTAACCTTATTAATATCACAGGTAATATTGTTTGGTCTTCAAATGCATATGCAACTGCAGAAGATGCATTTGCACAGCTTCTGGAATCAGGGAATCTTGTGGTGAGAGCCTCTAATGGTAGAACCACAGAATCCTATTTGTGGCAGAGTTTTGATTATCCTTCTGACACATATATGCCTGGAATGAAGATTGGGAAGAACCTAGTTACTGGTTTGGAGACATTCTTAACATCTTGGAAGAGTAAAGATGACCCTGCCCCTGGTAAGTACTCAATTCATCTTGACACTCATGGTTGGCCACAGGTGGTTATCAGAAAAGGAACCACTATAGTGTCACGATTTGGATCGTGGAATGGTCTTGAGTTGACAGGAAATCCAGCAAGGTCAGAAGCATCATTGGTCTTTCAATTCACATATAGTGAAAGTGAAGTTTATGTGGGTTACCAACTCAGGAAGAGTTCTGAGTTGTCTATGTTGTCAAGAGATGTACTGCATCCATCAGGCAACATGCAGCGATTCGTATGGATCAATCGGATCCAGAATTGGGCACTCTCCTCAACGTCTCTGTCAAATCAGTGCCAACATTATGCATGGTGTGGTGCTAATGCCGTCTGCAATAGCAATAACTTCCCTGTTTGTGGATGCTTGACCGGGTTCAGTCCTAAGTCTCCAAAAGATTGGAATAATGGGAACTGGTTTACTGGATGTGAACGCAGGACGAACTTGAATTGCCATGATGATGGCTTCTTGAGTGGTTGCTTGCTTTGGTTTGTCGAACTGGTGGATATAATCCAATATAGCCAGCGCGGTCAAGACCTTTATGTAAGGCTAGCTGCTTCAGACATTGATAGTGTAAAGAAAATGGAGCGATCCAACAAAGACAAAAGACTAGTGGGTATCATAATTGTATGTGGTGTTTTGGTCATGATTATCTTCCTCTTTCTGGGACACTTAACCTATAAACAAAGTGACAGCAGAAGAAAGAGAGTGGCAGAGAAAATTCACAACCAGGATTACAGATGTGGACAAAGAAAGGAAGAGGTGGACTGGCCAACATTTGATTTTCAAACTATAGCTAATGCAACAGCCAACTTTTCTAGTGATAACAAGGTGGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGCACATTAATTGATGGACAAGAGATAGCTGTGAAGAGGCTCTCCATAAATTCTGGCCAAGGACTAAATGAATTGAGAAATGAAGTCAATACAATTGCTAAGCTTCAGCACCGTAATCTTGTTAAGCTTTTTGGTTGTTGTCTTGAGGAGGAAGAGAAAATGTTAGTATATGAATATGTGCCTAACAAAAGCTTGGACTCCTTTATATTTGACCAAACAAGGAGAAAATTACTAGATTGGCCAACACGCATGCATATTATTGTTGGCATTGCTCGTGGGCTTCTTTATCTTCATCAAGACTCTAGAATGAGGATTATTCACAGGGACCTCAAAGCTAGCAATATTCTTCTAGATGCCAATATGAATCCAAAAATCTCTGACTTTGGGCTTGCGAAGGCCATTGGGGGAGATCAAACTGAGGCGAAAACTCATCGGATAGTTGGGACATATGGTTATATGCCTCCTGAGTATGCAGTTCATGGGAAATTTTCTGTGAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTGGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGACCCGAATCATAGCCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGCAGAGACACTTACAACTGATTGATGATTCATTAAGCAACGCTTCTGATGCAACTGAAATACTTAGATGCATACATATTGCTCTATTATGTGTGCAACAAAGTCCGGAAGACAGGCCAGACATGCTTTCTGTGGTTGTAATGTTAACTAGTGATAGCAATCTCCCTAAGCCAAAACAGCCTGCATTTTATGTGGAAAGGAATTGTCACAATAAAGGCTTTCTAGCAAGTAATCAGAACACATGTTCTGAAAATGAAGTTACAATCTCAGTGGTAGAGGCAAGGTAG 2556 0.4096 MSRVRAKYESSKLESVCLIAIASVTKQMMSRERDKFLNSASRLNESFYGITVYIINYDFSIKFTLPSTCPLSKNMRSLVSLFMTSLFASFLSSFSALDILTTHKLIKDGDKLVSARGTFELGFFSPGNSRNRYLGIWYVASPRTPIWVANREAPIRDGSGILRITEGGILNLINITGNIVWSSNAYATAEDAFAQLLESGNLVVRASNGRTTESYLWQSFDYPSDTYMPGMKIGKNLVTGLETFLTSWKSKDDPAPGKYSIHLDTHGWPQVVIRKGTTIVSRFGSWNGLELTGNPARSEASLVFQFTYSESEVYVGYQLRKSSELSMLSRDVLHPSGNMQRFVWINRIQNWALSSTSLSNQCQHYAWCGANAVCNSNNFPVCGCLTGFSPKSPKDWNNGNWFTGCERRTNLNCHDDGFLSGCLLWFVELVDIIQYSQRGQDLYVRLAASDIDSVKKMERSNKDKRLVGIIIVCGVLVMIIFLFLGHLTYKQSDSRRKRVAEKIHNQDYRCGQRKEEVDWPTFDFQTIANATANFSSDNKVGEGGFGPVYKGTLIDGQEIAVKRLSINSGQGLNELRNEVNTIAKLQHRNLVKLFGCCLEEEEKMLVYEYVPNKSLDSFIFDQTRRKLLDWPTRMHIIVGIARGLLYLHQDSRMRIIHRDLKASNILLDANMNPKISDFGLAKAIGGDQTEAKTHRIVGTYGYMPPEYAVHGKFSVKSDVFSFGVLALEILSGKKNRDFSDPNHSLNLLGHSWRLWVEQRHLQLIDDSLSNASDATEILRCIHIALLCVQQSPEDRPDMLSVVVMLTSDSNLPKPKQPAFYVERNCHNKGFLASNQNTCSENEVTISVVEAR* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1213 851 SMART serkin_6 534 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1213 851 SMART blect_4 103 223 IPR001480 -
Ahy18g1213 851 Pfam Protein tyrosine and serine/threonine kinase 537 803 IPR001245 GO:0004672|GO:0006468
Ahy18g1213 851 SUPERFAMILY Protein kinase-like (PK-like) 518 805 IPR011009 -
Ahy18g1213 851 ProSiteProfiles Protein kinase domain profile. 534 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1213 851 Pfam S-locus glycoprotein domain 282 392 IPR000858 GO:0048544
Ahy18g1213 851 ProSiteProfiles Bulb-type lectin domain profile. 97 217 IPR001480 -
Ahy18g1213 851 Gene3D - 93 220 IPR036426 -
Ahy18g1213 851 Gene3D Phosphorylase Kinase; domain 1 508 609 - -
Ahy18g1213 851 PANTHER - 419 849 - -
Ahy18g1213 851 Gene3D Transferase(Phosphotransferase) domain 1 610 818 - -
Ahy18g1213 851 Pfam Domain of unknown function (DUF3403) 806 851 IPR021820 GO:0004674
Ahy18g1213 851 CDD STKc_IRAK 540 806 - -
Ahy18g1213 851 Pfam D-mannose binding lectin 144 249 IPR001480 -
Ahy18g1213 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 145 254 IPR036426 -
Ahy18g1213 851 PIRSF SRK 70 420 IPR024171 GO:0004674
Ahy18g1213 851 PIRSF SRK 418 851 IPR024171 GO:0004674
Ahy18g1213 851 CDD B_lectin 105 223 IPR001480 -
Ahy18g1213 851 PANTHER - 83 419 - -
Ahy18g1213 851 PANTHER - 83 419 - -
Ahy18g1213 851 PANTHER - 419 849 - -
Ahy18g1213 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1213 Ahy-Chr18 20366183 20369943 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1213 462 819 Receptor kinase-like Gene Family AT4G05200 52.925 8.64e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1213 PK_Tyr_Ser-Thr 1.40E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1213 - - adu:107462504 1624.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1213 18 20366183 20369943 Ahy18g1213 18 20366183 20369943 ECH