Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1207 ATGGATCTGCCAATATTTGATTTATCAACCGTAGTTTATGCCACTAATTACTTCTCTAGTGACAACAAATTGGGAGAAGGTGGATTTGGATCGGTATACAAGGGTGCACTTGAAAATGGGACAGAGATTGCAGTCAAGAGGCTTTCCATTGACTCTGAACAAGGACTGGATGAACTTAAAAATGAAGTTCAGTTAATTGCAAAACTTCAGCATCGCAATCTTGTAAAGCTTCTTGGTTGCTGCATTCAGCCAAACGAAAAACTCTTGATTTATGAGCTCGTGCCCAATAGGAGTTTGGACACTTTTATTTTTGATGATTCTAGAAGAAAATTATTAGATTGGGCGAAGCGCTTTCAAATTATAGGCGGGACAGCTCGAGGACTAGTTTATTTACATCAGGATTCTAGGCTAAGAGTTATTCACAGAGATCTAAAAGCTAGCAATATCCTTCTTGATAAAGACATGAACGCGAAAATATCAGACTTTGGTCTTGCTAGGACATTTGCCGGAGATCAATCTGAGGCCACAACAAAAAGAGTGATGGGAACTTATGGCTATATTTCTCCTGAGTATGCAGTGCACGGATCCTTCTCAACGAAATCTGATGTGTTCGCCTTTGGCGTAATTGTGCTTGAGATAGTCAGTGGGAAGAAGAACAGAGAGTTTTGCGTCCCTCACCAACGTCTCTACCTTCTTGGACATGCATGGGAGCTCTGGAATGAGGAGAGGCCTTTGGAGCTAGTGGATGAATCAGTGCGCGATTCGGTCATTGAAGTTGAAGCATTGAGATGCATACAGATAGGGCTTTTATGTGTTCAAGGGAGACCAGAAGATAGGCCTAACATGTCATCTGTAGTTCGTATGCTGGAAGATGATAAACCGTTGCCTGAGCCGAGGCTGCCGGCGTTTTACTCGCACCATGAAGAATCTCTGGGAAGAGATGATGAAGTTTCAGCAAATGAGGTTACCGTTTCATCGTTAGGGGCAAGATAG 993 0.427 MDLPIFDLSTVVYATNYFSSDNKLGEGGFGSVYKGALENGTEIAVKRLSIDSEQGLDELKNEVQLIAKLQHRNLVKLLGCCIQPNEKLLIYELVPNRSLDTFIFDDSRRKLLDWAKRFQIIGGTARGLVYLHQDSRLRVIHRDLKASNILLDKDMNAKISDFGLARTFAGDQSEATTKRVMGTYGYISPEYAVHGSFSTKSDVFAFGVIVLEIVSGKKNREFCVPHQRLYLLGHAWELWNEERPLELVDESVRDSVIEVEALRCIQIGLLCVQGRPEDRPNMSSVVRMLEDDKPLPEPRLPAFYSHHEESLGRDDEVSANEVTVSSLGAR* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1207 330 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Ahy18g1207 330 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 5 322 - -
Ahy18g1207 330 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 322 - -
Ahy18g1207 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Ahy18g1207 330 ProSitePatterns Protein kinases ATP-binding region signature. 24 46 IPR017441 GO:0005524
Ahy18g1207 330 Gene3D Transferase(Phosphotransferase) domain 1 94 295 - -
Ahy18g1207 330 Pfam Protein tyrosine and serine/threonine kinase 21 289 IPR001245 GO:0004672|GO:0006468
Ahy18g1207 330 MobiDBLite consensus disorder prediction 307 330 - -
Ahy18g1207 330 CDD STKc_IRAK 24 290 - -
Ahy18g1207 330 Gene3D Phosphorylase Kinase; domain 1 2 93 - -
Ahy18g1207 330 ProSiteProfiles Protein kinase domain profile. 18 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1207 330 SMART serkin_6 18 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1207 Ahy-Chr18 20252233 20255689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1207 6 311 Receptor kinase-like Gene Family AT4G11480 56.169 1.24e-124 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1207 PK_Tyr_Ser-Thr 9.60E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1207 - - aip:107611884 659.448