Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1203 ATGATTTCTAATGAGGAAGAGGTGTATATTGTATATTGGAGTGTTGATAGTTCAGTTCATCAGAGGCTGCAGACAGCAACGGATGGATTCAGCCAGCGGAGAAGTTGGAGGGGTGGAAATACAGGTTGGACCACAGTTTCGCACATACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAACAGGTTTCCCATGTGTAATTGCTTGGATGGATTTGTGCAGAATACAACTGATTCATCATGTGGTTGTGTTAGGAGAACCTCATTGAGTTGCAATCATTCAGATGGGTTTGTGAAGTTTTCGGGGCTAAAGTTACCAGACACTGAAGGGACATGGTTTAATACAAGTATGAGTTTTGAGGATTGTAGAATTTTGTGCGTGAAAAACTGCTCTTGTACGGCTTATGCAGCTTTGGATGTCAGTGAAGGGCCAAATTCAAATGGTTGTTTACTTTGGTTTGGTAATCTGATGGATATGAAAGTGATGACTACATCTGAAGATATTTATGTAAAGATGGCAGGGAAAGATGTAGAAGCAATTGTACAAAAAAGATTGCCGAAGTTCAAGAAAAAGAAGCAAAAGATTACCACTGCCGTAATCTGGGTGCTGTCTTCTGGAATTTTGATCTTATGCTTGGCCGTCATCATTTATAGATGGGAGATGCGTAAGAAAGGAAAGATAAAAGAAGAAAGAGAATCAGATGATTGTCAGCACGATGAGGAAGATCTAGAATTGCCCTTATTTGATATAAATACGGTTACTTCTGCAACAAACAATTTTTCAACTGACAACTTATTAGGGAGAGGTGGTTTTGGACCAGTTTATAAGGGTATCTTGGAAGATGGACAGGAAATAGCTGTCAAGAGGCTTTCGAAGAATTCAAGCCAAGGATTCGAAGAGTTCAAAAATGAAGTTATGCATGTTTCCAAACTTCAGCACAGGAATTTAGTAAGGCTACTAGGGTGCTGCATTCAAGCTGGGGAAAGATTGTTGATTTATGAATTTATGAGCAACAAAAGCTTGGACTTCTTCATATTTGATTATGAGAAGGGAAAGCTACTAGATTGGCCAAAGCGTTTTTGTATCATCAATGGGATTGCCAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAGGCTGGGAATGTTTTGTTAGATGATGAATTGAATCCTAAAATCTCGGACTTTGGAATAGCAAGAAGCTTTGTAGGAAATGAAAGCGAAGCAAATACAAGACATATTGTTGGAACTTATGGCTATCTATCACCAGAGTACATAGTTGGTGGGCTGTACTCAACAAAATCTGATGTCTATAGCTTTGGTGTACTAATATTAGAAATAGTTAGTGGGAAGCGAAATAAAGGATTCATCGATATTGAACACTACTTTAATCTTCTTGCCAATGCATGGACACTTTTAGCCAAAGGCAAGTGCTTAGAAATAGTTGATGCATCGATCAGAGACTCAATTAATTTGCCAGAAGTCATAAGAACAATTCATGTCGGTTTGCTATGTGTGCAACGAAATCCAAAAGATCGACCAAGCATGTCATATGTGCTTATGATGCTGAGTAGTGAATGGGAACTACCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGACGTGGTTGGTGACCAATCTACATTAAGCAACAATGAACTCACAGATACACAGGTCCATCCGCGTTAG 1740 0.3902 MISNEEEVYIVYWSVDSSVHQRLQTATDGFSQRRSWRGGNTGWTTVSHIPVDDCDYYGKCGAYASCDTNRFPMCNCLDGFVQNTTDSSCGCVRRTSLSCNHSDGFVKFSGLKLPDTEGTWFNTSMSFEDCRILCVKNCSCTAYAALDVSEGPNSNGCLLWFGNLMDMKVMTTSEDIYVKMAGKDVEAIVQKRLPKFKKKKQKITTAVIWVLSSGILILCLAVIIYRWEMRKKGKIKEERESDDCQHDEEDLELPLFDINTVTSATNNFSTDNLLGRGGFGPVYKGILEDGQEIAVKRLSKNSSQGFEEFKNEVMHVSKLQHRNLVRLLGCCIQAGERLLIYEFMSNKSLDFFIFDYEKGKLLDWPKRFCIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDDELNPKISDFGIARSFVGNESEANTRHIVGTYGYLSPEYIVGGLYSTKSDVYSFGVLILEIVSGKRNKGFIDIEHYFNLLANAWTLLAKGKCLEIVDASIRDSINLPEVIRTIHVGLLCVQRNPKDRPSMSYVLMMLSSEWELPQPKKPGFFIERDVVGDQSTLSNNELTDTQVHPR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1203 579 SMART serkin_6 268 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1203 579 SMART ntp_6 100 180 IPR003609 -
Ahy18g1203 579 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 4 559 - -
Ahy18g1203 579 Gene3D Phosphorylase Kinase; domain 1 242 343 - -
Ahy18g1203 579 Pfam Protein tyrosine and serine/threonine kinase 271 537 IPR001245 GO:0004672|GO:0006468
Ahy18g1203 579 CDD STKc_IRAK 274 539 - -
Ahy18g1203 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Ahy18g1203 579 ProSiteProfiles PAN/Apple domain profile. 99 181 IPR003609 -
Ahy18g1203 579 Pfam PAN-like domain 99 167 IPR003609 -
Ahy18g1203 579 ProSiteProfiles Protein kinase domain profile. 268 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1203 579 Gene3D Hepatocyte Growth Factor 95 181 - -
Ahy18g1203 579 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 559 - -
Ahy18g1203 579 Gene3D Transferase(Phosphotransferase) domain 1 344 548 - -
Ahy18g1203 579 SUPERFAMILY Protein kinase-like (PK-like) 250 552 IPR011009 -
Ahy18g1203 579 CDD PAN_AP_plant 95 181 - -
Ahy18g1203 579 Pfam S-locus glycoprotein domain 3 83 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1203 Ahy-Chr18 20172560 20195264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1203 214 579 Receptor kinase-like Gene Family AT3G45860 50.656 5.01e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1203 PK_Tyr_Ser-Thr 3.00E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1203 - - adu:107462379 927.546