Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1200 ATGCGCTATAGGGGCACGCGTCTGAGGAGTGGCAAGTGGGTGTCGGAGATAAGGTTGCCACGTACCACGAAGCGCATTTGGCTAGGGACATACCCCACACCTGAGATGGCTGCTGCTGCTTACGATACTGCCACTCTTGCATTGAGGGGCCCCGAAGCCCATCTCATACTCTCTTATCCTATTCCTGCTTCCTTCTCCGATTCTGATTCTGATATTCGCGATGCTGCTGCCGTCGCCGCCTCCATCGTCGCAGCTCCTCCTGCTCAGCAAGTAGGGGATTATTTTGATGAGGATGAGGTGTTGAATATGCCGAGTGTAATCGAAGACATGGACAGGGGACTACTGATTAGCCCACCCAGGATCCCTTCTTTCTCCGACGATGACTACTTCCCCCTCGACCACACCCACTTTTATTCAGATATCTATACCCTTTGGTAA 438 0.5251 MRYRGTRLRSGKWVSEIRLPRTTKRIWLGTYPTPEMAAAAYDTATLALRGPEAHLILSYPIPASFSDSDSDIRDAAAVAASIVAAPPAQQVGDYFDEDEVLNMPSVIEDMDRGLLISPPRIPSFSDDDYFPLDHTHFYSDIYTLW* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1200 145 ProSiteProfiles AP2/ERF domain profile. 2 60 IPR001471 GO:0003700|GO:0006355
Ahy18g1200 145 Gene3D AP2/ERF domain 1 60 IPR036955 GO:0003700|GO:0006355
Ahy18g1200 145 Pfam AP2 domain 3 50 IPR001471 GO:0003700|GO:0006355
Ahy18g1200 145 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 2 128 - -
Ahy18g1200 145 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 128 - -
Ahy18g1200 145 CDD AP2 2 55 IPR001471 GO:0003700|GO:0006355
Ahy18g1200 145 SUPERFAMILY DNA-binding domain 3 55 IPR016177 GO:0003677
Ahy18g1200 145 SMART rav1_2 2 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1200 Ahy-Chr18 20076298 20077258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1200 3 134 AP2-EREBP Transcription Factor Family AT5G52020 45.399 2.89e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy18g1200 AP2 5.60E-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1200 - - aip:107612168 260.766