Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1199 ATGGAAGCCTTTAGCTTTCTTCTGTTATGCTTCTCTCTGCTGGATTTAACAGCATTTTGTGTTGCAAGAGACACAATTACCACACTGCAATCTATAAGTGATGGTGACACATTAGTTTCAGCAGATGAAACCTTTGCATTGGGAATCTTCAGCCCTGGAACTTCCAAGAACCATTATGTTGGAATTTGGTATAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAACCCCCTCACTGACTCCTCAGGGGTTTTGAAGGTCAACAACACCGGAATTCTAGTCCTTCTTGATAGTAATAATAGTCTTATTTGGTCATCCAACACCACACGATCGGCACAAAATCCAGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACACCAATAGTGACACGGAAGATTTTCTGTGGCAAAGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTCGGAAGAAACTTAGCTACAGGATTAAATTGGTTGATAACATCATGGAAAAGCTCTGATGATCCTTCTCAAGGTAGCTTTAGCTATCAATTCGACATTGATGGATATCCGCAATTAGTATTAAGAGAAGGCACAACAAAAAGATTTCGTTTTGGATCATGGAATGGTATTCAGTTTAGTGGGGGACCACAATTGAAAAATGACTCTGTATTTAGATTTAGCATGATTTCTAATGAGCAAGAGGTATATTATGTATATTGGCTTGTTGATAATTCAGTGCATCAAAGGTTGCAGGTAACATCGGACGGATTCAGCCACCGGACAAGTTGGAGTGGTGGAAATACAGGTTGGACCACAGTTTCGCACTTACCAGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAACAGTTTTCCCATGTGTAATTGCCTGGATGGTTTTGTACAGAAAACAACTGATTCATCAAGTGGTTGTGTTAGGAGAACTTCATTGAGTTGCAATCATTCAGATGGGTTTGTGAAGTTTTCGGGGCTAAAGTTACCAGACACTGAAGGGACATGGTTTAATAGAAGCATGAGACTTGAGGATTGTAGGATCTTGTGCTGGAACAATTGCTCTTGTATGGCTTATGCAGCTTTGGATGTCAGCAAAGGGCCAAATGGTTGTTTACTTTGGTTTGGTAATCTCATAGATATGAAAGCGTTGAGTGCATCGGATGAAGATATTTATATAAGGATGGCAGGCAAAGATGTAGAAGCTATTGAACAAAACAGATCACGGAAGTCCAAGAAACGGAAGCGAAAGATTATCATTGCCGTGAGCTGTGTGTTGTCTTTTGGAATTTTGATCCTATGCTTGGCCTTCATCTATAGATGGAAGAAGCATCTGAAAGGAAAGATTAAAGAAGAAACAGAATCAGGTGCAATAAATAGTCACCATGATGAGGATGATCTGGAACTGCCCTTATTTGATATGTGCACAATTACTTCTGCAACAAGTAATTTTTCAAGTGACAATATACTAGGGACAGGTGGTTTTGGATCAGTTTATAAGGGTATCTTGGAAGATGGGCAGGAAATAGCTGTCAAGCGACTTTCGCAGAATTCAAGTCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCTAAACTTCAGCACCGAAATTTAGTGAAGCTATTAGGGTGCTGCATTCAAGCAGGCGAGAGAATGTTGATTTATGAATTTATGCACAACAAAAGCTTGGACTTCTTTATATTTGATTGTGAGAGGGGAAAACTACTAGACTGGCCAAGGCGTTTTCTTATTATTAATGGAATTGCTAGAGGCTTGCTTTATCTTCATCAAGATTCAAGATATAGAATAGTACATAGAGATCTTAAGGCTGGGAATGTTTTGTTAGATGACGAATTGAATCCTAAAATCTCAGACTTTGGACTAGCACGAAACTTCATAGGAAATGAAAACCAAGCAAAAACAAGTCATATTGTTGGGACTTACGGCTATCTGTCACCGGAGTGCATAGTTGACGGGATATACTCAACAAAATCTGATGTCTACAGCTTCGGAGTACTGGTGTTAGAGATAGTTAGTGGGAAGAGAAACAGAGGATTCATCCATATTGATCACAATTTGAATCTTCTTGGGCATGCATGGACACTTTTCACAGAAGGCAAGTGCTTGGAAATAGTCGATGCATCCATCAAAGACTCCATTGATTTGCCAGAAGTCCTAAGATCAATTCATGTTGGTCTACTATGCGTGCAACGAAATCCAGAAGATCGACCAAGCATGTCGTATGTGCTTATGATGCTAAGTAGCGAATGGACATTGCCTCAGCCAAAGAAGCCCGGGTTCTTTATTGAGAGAGATGCTGTTGGTGACAGTTCCTCATCAAGCAACAATAAACTATTATCAGTTAATAATCTCACAGTCACCCAAGTCTGTCCGCGATAG 2457 0.3985 MEAFSFLLLCFSLLDLTAFCVARDTITTLQSISDGDTLVSADETFALGIFSPGTSKNHYVGIWYNKDPTKAIVWVANRENPLTDSSGVLKVNNTGILVLLDSNNSLIWSSNTTRSAQNPVAKLLNSGNFVVQDDTNSDTEDFLWQSFDYPGDTILPGQKFGRNLATGLNWLITSWKSSDDPSQGSFSYQFDIDGYPQLVLREGTTKRFRFGSWNGIQFSGGPQLKNDSVFRFSMISNEQEVYYVYWLVDNSVHQRLQVTSDGFSHRTSWSGGNTGWTTVSHLPVDDCDYYGKCGAYASCDTNSFPMCNCLDGFVQKTTDSSSGCVRRTSLSCNHSDGFVKFSGLKLPDTEGTWFNRSMRLEDCRILCWNNCSCMAYAALDVSKGPNGCLLWFGNLIDMKALSASDEDIYIRMAGKDVEAIEQNRSRKSKKRKRKIIIAVSCVLSFGILILCLAFIYRWKKHLKGKIKEETESGAINSHHDEDDLELPLFDMCTITSATSNFSSDNILGTGGFGSVYKGILEDGQEIAVKRLSQNSSQGLQEFKNEVMHIAKLQHRNLVKLLGCCIQAGERMLIYEFMHNKSLDFFIFDCERGKLLDWPRRFLIINGIARGLLYLHQDSRYRIVHRDLKAGNVLLDDELNPKISDFGLARNFIGNENQAKTSHIVGTYGYLSPECIVDGIYSTKSDVYSFGVLVLEIVSGKRNRGFIHIDHNLNLLGHAWTLFTEGKCLEIVDASIKDSIDLPEVLRSIHVGLLCVQRNPEDRPSMSYVLMMLSSEWTLPQPKKPGFFIERDAVGDSSSSSNNKLLSVNNLTVTQVCPR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1199 818 SUPERFAMILY Protein kinase-like (PK-like) 484 792 IPR011009 -
Ahy18g1199 818 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Ahy18g1199 818 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Ahy18g1199 818 SMART blect_4 29 150 IPR001480 -
Ahy18g1199 818 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 813 - -
Ahy18g1199 818 CDD PAN_AP_plant 328 413 - -
Ahy18g1199 818 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Ahy18g1199 818 CDD B_lectin 30 150 IPR001480 -
Ahy18g1199 818 Gene3D Transferase(Phosphotransferase) domain 1 577 780 - -
Ahy18g1199 818 ProSiteProfiles Protein kinase domain profile. 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1199 818 CDD STKc_IRAK 507 772 - -
Ahy18g1199 818 SMART serkin_6 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1199 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 181 IPR036426 -
Ahy18g1199 818 Pfam Domain of unknown function (DUF3403) 773 818 IPR021820 GO:0004674
Ahy18g1199 818 PANTHER - 12 813 - -
Ahy18g1199 818 SMART ntp_6 333 412 IPR003609 -
Ahy18g1199 818 Pfam PAN-like domain 332 398 IPR003609 -
Ahy18g1199 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Ahy18g1199 818 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Ahy18g1199 818 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Ahy18g1199 818 Pfam D-mannose binding lectin 72 176 IPR001480 -
Ahy18g1199 818 Pfam Protein tyrosine and serine/threonine kinase 504 770 IPR001245 GO:0004672|GO:0006468
Ahy18g1199 818 Gene3D - 19 147 IPR036426 -
Ahy18g1199 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Ahy18g1199 818 Gene3D Hepatocyte Growth Factor 328 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1199 Ahy-Chr18 19851737 19855924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1199 489 818 Receptor kinase-like Gene Family AT4G23290 54.678 6.33e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1199 PK_Tyr_Ser-Thr 3.10E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1199 - - adu:107462379 1460.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1199 18 19851737 19855924 Ahy18g1199 18 19851737 19855924 ECH
Ahy18g1199 18 19851737 19855924 Ahy8g1877 8 37634938 37639003 hybridization
Ahy13g1782 13 28865985 28870374 Ahy18g1199 18 19851737 19855924 PCT