Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1185 ATGTTTAAGAAGGGGGGTTATTCACAAGACCACAGGTTCAAGCTGTGGAAGCAGCCACTGATATGTAATTATCAGGGTGTGTTGGAAGATGGAAGAGAAATAGCAGTTAAGAGGCTTTCAGAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTTATGCATGTAGTCAAACTTCAGCACAGGAATTTGGTGAGGCTTCTAGGATGTTGCATTCAAGCAGAGGAGAGGATTCTAGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATACTTATGGTTTATCTCACAAGAAAATCACTCTAACTCTTTTCTTTGAAAAAGATGAAGAGAGAGGCAAGATATTAGACTGGCCTAAGCGGTTCATTATTATCATTGGGATTGCACGAGGCCTTCTCTACCTCCATCAAGATTCAAGGCATAGAATAGTCCATAGAGATCTTAAGGCTGGCAATGTTTTGTTAGATGAGGAAATAAATGCGAAAATCTCTGACTTTGGACTAGCCAGAACCCTTGTAGGAAATGAAAATGAAGCAAACACGGCAACTGTTGTCGGAACCTATGGCTATCTATCTCCAGAGTACCTTATCGATGGAATATTCTCAACAAAATCTGATGTCTATAGCTTTGGAGTGCTGGTGTTAGAGATAGTTACTGGAAAGAGAAATAGAGGCTTCAACAATAAAAATCATGGTTTTAATCTTCTCGGACATGTTTGGACTCTCTTCATAGATGGTAAGTGTTTAGAAATAGTTGATGGATCAATCAGAGATGACGACGCATCGAATTTATGTGGAGTCATAAGAGCGATTCATGTTGGTCTACTATGCGTCCAAAGAAGTCCAGAGGATAGGCCAAGCATGTCACATGCGCTTATGATGTTGAGTAGTGAATGGCCACTGCCTCAACCGAAAATGCCGGGCTTCTTTACTGAGAGAGATCCTGTTGGTGACACTTCTTCATCAGGCAACACTAAAGTAGTGTCAATTAATGAAGTCACAATTAGTGAGCTGCATCCAAGGTAG 1041 0.4025 MFKKGGYSQDHRFKLWKQPLICNYQGVLEDGREIAVKRLSEDSRQGLQEFKSEVMHVVKLQHRNLVRLLGCCIQAEERILVYEFMPNKSLDYFIFDTYGLSHKKITLTLFFEKDEERGKILDWPKRFIIIIGIARGLLYLHQDSRHRIVHRDLKAGNVLLDEEINAKISDFGLARTLVGNENEANTATVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVTGKRNRGFNNKNHGFNLLGHVWTLFIDGKCLEIVDGSIRDDDASNLCGVIRAIHVGLLCVQRSPEDRPSMSHALMMLSSEWPLPQPKMPGFFTERDPVGDTSSSGNTKVVSINEVTISELHPR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1185 346 Gene3D Phosphorylase Kinase; domain 1 5 84 - -
Ahy18g1185 346 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 24 320 - -
Ahy18g1185 346 Gene3D Transferase(Phosphotransferase) domain 1 85 305 - -
Ahy18g1185 346 SUPERFAMILY Protein kinase-like (PK-like) 24 300 IPR011009 -
Ahy18g1185 346 Pfam Protein tyrosine and serine/threonine kinase 30 295 IPR001245 GO:0004672|GO:0006468
Ahy18g1185 346 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 320 - -
Ahy18g1185 346 ProSiteProfiles Protein kinase domain profile. 1 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1185 346 Pfam Domain of unknown function (DUF3403) 301 346 IPR021820 GO:0004674
Ahy18g1185 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Ahy18g1185 346 SMART serkin_6 24 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1185 Ahy-Chr18 19526610 19528187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1185 24 346 Receptor kinase-like Gene Family AT4G23140 49.851 6.30e-104 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1185 PK_Tyr_Ser-Thr 1.40E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1185 - - ahf:114925771 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1185 18 19526610 19528187 Ahy18g1185 18 19526610 19528187 ECH