Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1183 ATGCACATAGCAAAACTTCAGCACAGGAATTTGGCGAAGCTTCTAGGATGTTGCATTCAAGTGAAAGAAAGGATGCTGGTCTATGAGTTTATGCCAGATAAAAGCTTGGACCACTTCATATTTGCTTTTGAAGCTCATAAGAATATCAGTACAACTTATTTATCTTCTAAAGCAGATGGTGACAAAGGCATATTACTAGACTGGCCTAAGCGTTTTCTCATTATAAATGGTATTGCACTGGGCCTTCTATATCTTCATCAAGACTCGAGGCATAGAGTAATACATAGAGATCTCAAGGCTGGAAATATTTTGTTAGATATTGAAATAAATCCAAAAATCTCATACTTTGGCCTGGCAAGAAGCATCCTAGGAAACAAAAATGAAGCAACCACAAATCATGTTGTTGGAACTTATGGCTATATGGCACCAGAGTACATAATTGATGGACTATTCTCAACAAAATCCGATATCTATAGCTTTGGTGTGTTAGTGTTGGAAATAGCATCGACATTTTTCATAGAAGACAAGTCCTTAGATATAGTTGATGCATCTATCAGAGACTCAATTAATTTACCAGAAGTCATGAGATCGATTCATGTGGGTCTGTTATGCGTGCAACAAAGTCTAGAGGATCGGCCAAACATGTCATACGTGCTTAAGGTGCTGAGTAGTGAATGGGAATTGCCTCAACCGAAAAAGCTTGGATTCTTCACTCAGAGAGATTTGGTTGGTGGCAGTTCTTCGTCAAGCAGCAGCAACAACAAAGTATTGTCAATTAATAAACTCTCGGTTAGTGAGGTTGATCCACGGTAG 813 0.3862 MHIAKLQHRNLAKLLGCCIQVKERMLVYEFMPDKSLDHFIFAFEAHKNISTTYLSSKADGDKGILLDWPKRFLIINGIALGLLYLHQDSRHRVIHRDLKAGNILLDIEINPKISYFGLARSILGNKNEATTNHVVGTYGYMAPEYIIDGLFSTKSDIYSFGVLVLEIASTFFIEDKSLDIVDASIRDSINLPEVMRSIHVGLLCVQQSLEDRPNMSYVLKVLSSEWELPQPKKLGFFTQRDLVGGSSSSSSSNNKVLSINKLSVSEVDPR* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1183 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Ahy18g1183 270 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1183 270 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 242 - -
Ahy18g1183 270 Gene3D Transferase(Phosphotransferase) domain 1 31 232 - -
Ahy18g1183 270 PIRSF ILK 74 228 - -
Ahy18g1183 270 PIRSF ILK 1 48 - -
Ahy18g1183 270 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Ahy18g1183 270 SUPERFAMILY Protein kinase-like (PK-like) 3 222 IPR011009 -
Ahy18g1183 270 Pfam Protein tyrosine and serine/threonine kinase 3 220 IPR001245 GO:0004672|GO:0006468
Ahy18g1183 270 SMART serkin_6 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1183 270 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1183 Ahy-Chr18 19488601 19489822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1183 3 270 Receptor kinase-like Gene Family AT4G23290 45.515 1.13e-75 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1183 PK_Tyr_Ser-Thr 1.00E-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1183 - - ahf:112769706 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1183 18 19488601 19489822 Ahy18g1183 18 19488601 19489822 ECH