Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1172 ATGGAAGACTTCACAATAATGATTCTCTTATGCTTATTTTTGATGAACCATATGGTGGCTTCCACTGCAAGGGACACTATTGATTCACTGCAATCTATCAGTGATGGTGAGAAAATAGTTTCAGCTGATGAAATCTTTGTATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTTGGAATCTGGTATAACAAAGATCCAACAAAGGCAATAGTGTGGGTTGCAAACAGAGAAAAACCCCTCACTGGTTCCTCAGGGGTTCTGAAGCTCAACAACACGGGAATTCTAGTCCTTCTTGATCATAACAGCAGTCTTATTTGGTCCTCCAACGCAACAAGATCCATCCTGAATCCGGTTGCAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCAAGAAACAAGCAACAATGGTGCTAAGGAAGAAGATTTCGTATGGCAAAGTTTTGATTATCCAGGCGACACGGTCTTGCCTGAACAGAAGTTAGGAATAAATCTGAAAACAGGACAGAATCGATATCTAACCTCATGGAGCAGCTCGGATGATCCGTTTCCAGGTAGATATACTTTACAAATCGATATCAAGGGATATCCTCAAGTATTCATTAAAGAAGGTGCAAACAAAAGATTTCGTGCCGGATCATGGAATGGAGTTCAATTCAGTGGAACGCCACAAGTGAAAGGAAACCCAATCTTTAGATATAAATATGTTTCTAACGAGGAAGAGATATATTTTATGTATGAACTTATCAATAATTCAAACCCTCATAAAGTGGTTCTAACGCCGGAGGGAATCAACCAGAGAAGCCAGTGGAGTACGGACACATCGACTTGGATCAACTTGGCAAGGTTACCGGCTGATGATTGTGACTACTATGAAACATGTGGAGCTTATTCTAGTTGTAATGTTAACAACTATCCAATTTGTAGTTGTTTGGATGGATTTGTGCAAGATAATAATAAGAAGGAGCAAGGTTTATCAGATGGTTGTGTAAGAAGAACATCATTGGATTGTTATGGAGATGGGTTCTTGAAGTATTCAGGGCTGAAATTGCCAGATACAGAAAGATCATGGTATAGTAGAAATATCAGCATTGAAGATTGTAAGATGATGTGCTTGAAGAATTGTTCATGTATGGCTTATGCAGCTTTGGATATAAGTGAAGGCGCAAGTGGTTGTTTGATGTGGTTTGGTAATTTAAATGATATTAAAGCCCTGAATCCAAATTCTCTTGAAGATATTTACTTAAGAATGGCTGCTACAGAACTAGAGGAAAATAAATCACACAAATCAAATGTCCGAAAGAAAAAGACTATCATCATAATTTGTGCGTTATCTTCTAGTGTTCTAATCATATGCTTGGCCTTCATCGTCTTTAGATGGAAGATACGAAGGAAAGATGTAACAAGTGACCAACAAGAGGAAGATCCACAATTGCCTTTGTTTGATATGTCCACAATTTCTTCTGCAACAAATAATTTTTCAACCGATAGCATTTTGGGAAAAGGTGGCTTTGGTTCGGTATATAAGGGTGTATTAAAGGATGGAAAAGAAATAGCGGTTAAGAGACTCTTACAGAATTCAAGTCAAGGAATCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGAAATTTAGTGAAACTCCTAGGATGTTGCGTTTATGCAGAAGAAAGATTGCTAGTCTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAGAAGAAGAGCATGTTACTAGATTGGACTAGGCGCTTTGACATTATCAATGGGATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTTAAAGCTGCTAATATTTTATTAGACCGTGAAATGAATCCAAAAATTTCAGACTTTGGACTAGCTAGAAGTTTTGGAGGGAACGAAACAAAAGCAAACACAAGACATGTTGTTGGAACTTACGGATATTTATCACCAGAGTACATAATTGATGGAGTTTACTCAACAAAATCCGATGTATTCAGTTTTGGTGTATTGGTGTTAGAAATAGTGAGTGGAAATAGAAATAGAGGATTCATTCATCAAGATCATCAATTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTCATGCTCCAATAAGAGATACATCAAATTTATCTTCAATGTTAAGATCAATTCACGTGGGACTACTTTGTGTGCAAAAAAGTCCAGATGAGAGGCCAAACATGTCATATGTTGTTCAAATGTTGACTAGTGAATCCACACTACCTCTACCTAAAATGCCTGGGTTCTTTTTAGAAAGAGAAATGGTTGATGAAGGTTCTTCTTCAAGTAATAACAGAACATGCTCAATCAATGATGTCACAAATAGCATAGTGGAGGCTAGATAG 2439 0.3719 MEDFTIMILLCLFLMNHMVASTARDTIDSLQSISDGEKIVSADEIFVLGFFSPGTSKNRYVGIWYNKDPTKAIVWVANREKPLTGSSGVLKLNNTGILVLLDHNSSLIWSSNATRSILNPVAKLLNSGNLVVQETSNNGAKEEDFVWQSFDYPGDTVLPEQKLGINLKTGQNRYLTSWSSSDDPFPGRYTLQIDIKGYPQVFIKEGANKRFRAGSWNGVQFSGTPQVKGNPIFRYKYVSNEEEIYFMYELINNSNPHKVVLTPEGINQRSQWSTDTSTWINLARLPADDCDYYETCGAYSSCNVNNYPICSCLDGFVQDNNKKEQGLSDGCVRRTSLDCYGDGFLKYSGLKLPDTERSWYSRNISIEDCKMMCLKNCSCMAYAALDISEGASGCLMWFGNLNDIKALNPNSLEDIYLRMAATELEENKSHKSNVRKKKTIIIICALSSSVLIICLAFIVFRWKIRRKDVTSDQQEEDPQLPLFDMSTISSATNNFSTDSILGKGGFGSVYKGVLKDGKEIAVKRLLQNSSQGIQEFKNEVMHIAKLQHRNLVKLLGCCVYAEERLLVYEFMPNKSLDYFIFDEKKSMLLDWTRRFDIINGIARGLLYLHQDSRHRIVHRDLKAANILLDREMNPKISDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSTKSDVFSFGVLVLEIVSGNRNRGFIHQDHQFNLLGHAWKLFMEDKGYEIIHAPIRDTSNLSSMLRSIHVGLLCVQKSPDERPNMSYVVQMLTSESTLPLPKMPGFFLEREMVDEGSSSSNNRTCSINDVTNSIVEAR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1172 812 Pfam Domain of unknown function (DUF3403) 767 812 IPR021820 GO:0004674
Ahy18g1172 812 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 809 - -
Ahy18g1172 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Ahy18g1172 812 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Ahy18g1172 812 Gene3D Transferase(Phosphotransferase) domain 1 571 772 - -
Ahy18g1172 812 CDD PAN_AP_plant 335 420 - -
Ahy18g1172 812 Pfam PAN-like domain 340 404 IPR003609 -
Ahy18g1172 812 Gene3D - 18 150 IPR036426 -
Ahy18g1172 812 CDD B_lectin 31 153 IPR001480 -
Ahy18g1172 812 Pfam Protein tyrosine and serine/threonine kinase 498 766 IPR001245 GO:0004672|GO:0006468
Ahy18g1172 812 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544
Ahy18g1172 812 PANTHER - 12 809 - -
Ahy18g1172 812 Gene3D Phosphorylase Kinase; domain 1 458 570 - -
Ahy18g1172 812 ProSiteProfiles Protein kinase domain profile. 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1172 812 Pfam D-mannose binding lectin 73 178 IPR001480 -
Ahy18g1172 812 SMART ntp_6 339 419 IPR003609 -
Ahy18g1172 812 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Ahy18g1172 812 SUPERFAMILY Protein kinase-like (PK-like) 477 781 IPR011009 -
Ahy18g1172 812 Gene3D Hepatocyte Growth Factor 338 421 - -
Ahy18g1172 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Ahy18g1172 812 SMART blect_4 30 153 IPR001480 -
Ahy18g1172 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Ahy18g1172 812 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Ahy18g1172 812 SMART serkin_6 495 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1172 812 CDD STKc_IRAK 501 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1172 Ahy-Chr18 19049797 19053260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1172 471 812 Receptor kinase-like Gene Family AT4G11480 52.841 2.44e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1172 Pkinase 1.50E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1172 - - ahf:112769704 1096.26