Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1169 ATGATGAACAATCTTCCATTTCTCTTCGTCATTACAGGGATGGTTCTTCATTTTTTCTTTCTTCGTGATGTCTCAAGCGCAACGGATTCAATATCTATGGTTCAGCCTCTTCATGAAGGAAACACATTGGTTTCTAGTAATGGAACCTTTGAAATGGGGTTTTTCAGCCCAGGAAGTTCTTCAAACCATTACTTAGGTATTTGGTACAAGATTCTCCCGTTGAAAACCGTTGTTTGGGTTGCAAATAGATCCAACCCTGTCAAAGACAACACTAGCATACTCCACATAAACAACCAAGGGATTCTTCAACTTGTCAACAAGAACGGAACCGTCTTTTGGTCTACAAACTCCACCACAAAGATGAACCTTTCGAATCCGATTGCTCAGCTCTTAGATTCTGGAAATCTTGTTATTAGAGATGAGAATGACCAAGATTCCAAGAACTACTACGTCTGGCAAAGCTTTGATTATCCTTGTGATACACTCTTACCGGGGATGAAGCTCGGTTGGGATCTTAAAACCGGTCTTGAACGGCGGTTAACTGCTTGGAAGAATTGGGACGATCCCTCGCCGGGGAATCTTTCTTGGGGAATCTCGCTTGAGGGTTTTCCCCAAGGAATATTCTTGAAGGGCTCGAAAGAGTACTACCGTGTCGGTCCATGGATTGGTCTTCGTTTCAGTGGAACACCTGAATTGAAGCCCAATAACCTTTTTAGTTATAAATTCGTGTCGAACGAAAATGAAGTGTATTTTGTGTATAAGTATAATCTTGAAAAAAAGTCCCTTTTACTGAGACTCGTCATGAACGAAACCTTAGGTAACAGACACGGCTACATGTGGAACGATGGATCTTCGGGTTGGACGGAATTTTCTTCCCATTCGCCGAGAGAAGCGTGTGATCTCTATAATCACTGTGGTCCAAATGCGTATTGCAGCATCATAAGTGGCTATTCAACGTGCCAGTGTCTGAAGGGGTTCAAGCAAAAGTCATCACAAAACTGGACTGAAGGATGTTCTTCTTCATTGCTTGATGAGCAATCGAGATGCAACATGGATAATAAGACGGGTAGTCAGAGAGATGATAAGAATGGGTTTTCTAAAGTTGGAGGAATGAAATACCCAGATACTCGGCGTTCTTGGGTGAATGAGAGTATGAAGAATCTTGATGAATGCAGGGATAAATGCAGAGAGAATTGTTCGTGTATGGCTTATGCAAACTCAGATATTAGAGAAGGTGGTAGTGGCTGTTTGATGTGGTTCGGTGTTCTCGACGATATCAAAGAGTTTTCTGATGGCGGTGCTGATATATACATTCGAACGATCATCGATGGGAAGGAAGGGCACAAAAAGAAGAAGGTAGGACTGATAGTCATCGGTACCAGTGCCTCTGTTCTTGTGGTGGTTCTGATTTTTGGTTACATTGGCCAGAGAATAATAAACTGCAGAGTTAAGAAGAATAATGATGCATATGAAGACTACTTGGATCTTCCTATCTTTGACCTTGCTACAATTGCAAAAGCAACTGAAGACTTTTCCATTAGTAATAAACTTGGAAAAGGTGGATTTGGGACTGTATATAAGGGAACTCTAGTTGATGGACAAAATATTGCTGTGAAGAGACTTTTACAGGGATCTAATTCTGGACAAGGGTTGACAGAATTTATGAATGAAGTTTTATTAATTGCTAAACTTCAACATCGCAATTTAGTGAAGCTTCTTGGTTGTTGCATTCAAGATGGAGAAAAGATGCTTGTCTATGAATACATGCCCAATAAGAGCCTAGACAATTTTATCTTCGGTCACAAGGATGGTAGAGTTATTTTAGATTGGCCTAACCGCTTCAACATTATATGTGGAATTGCTCGAGGATTACTTTATCTTCATCAAGATTCTCGACTAAGGATTATACATAGAGATCTCAAAGCTAGCAATGTATTGCTTGACAAAGAGTTAAATCCTAAAATTTCTGATTTTGGGATGGCGAAATCATTTGGAGGAAATCAAACAGAAGGAAATACAAGTAGGATTGTTGGAACATATGGTTATATGGCTCCTGAATATGCTATTTACGGATTATTCTCAATAAAATCTGATATATTTAGCTTTGGAGTATTAATTTTGGAAATAGTAAGTGGAAGAAAGAATAGAATGATTTCTCGTGAAAATGAAGATGCAAATCTTATTGCACAAGCTTGGATATTATGGAAAGAAAAGAAGGCTCTAGACTTCATTGATTCATGCATGGAGAATTCTTATGTTGAATTAGAAGCATTGCGTTGCATCCACATCGGTCTCCTATGTGTGCAACAAAATCCTGAGGATAGACCAAATATGTCAAATGTGGTTATGATGTTGGGTAGTGAGGTTGCCTTGCCCCAACCTAAGGAGCCTTCTTTCCTCACTGAGACTTCTCTTCTTCAAGCAGTTGATTCTTCGAGCTACCAACAATGTATTTCAACTAATGAAATAAGTGTCACAGTATTGGAAGCCCGATAA 2496 0.3958 MMNNLPFLFVITGMVLHFFFLRDVSSATDSISMVQPLHEGNTLVSSNGTFEMGFFSPGSSSNHYLGIWYKILPLKTVVWVANRSNPVKDNTSILHINNQGILQLVNKNGTVFWSTNSTTKMNLSNPIAQLLDSGNLVIRDENDQDSKNYYVWQSFDYPCDTLLPGMKLGWDLKTGLERRLTAWKNWDDPSPGNLSWGISLEGFPQGIFLKGSKEYYRVGPWIGLRFSGTPELKPNNLFSYKFVSNENEVYFVYKYNLEKKSLLLRLVMNETLGNRHGYMWNDGSSGWTEFSSHSPREACDLYNHCGPNAYCSIISGYSTCQCLKGFKQKSSQNWTEGCSSSLLDEQSRCNMDNKTGSQRDDKNGFSKVGGMKYPDTRRSWVNESMKNLDECRDKCRENCSCMAYANSDIREGGSGCLMWFGVLDDIKEFSDGGADIYIRTIIDGKEGHKKKKVGLIVIGTSASVLVVVLIFGYIGQRIINCRVKKNNDAYEDYLDLPIFDLATIAKATEDFSISNKLGKGGFGTVYKGTLVDGQNIAVKRLLQGSNSGQGLTEFMNEVLLIAKLQHRNLVKLLGCCIQDGEKMLVYEYMPNKSLDNFIFGHKDGRVILDWPNRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGMAKSFGGNQTEGNTSRIVGTYGYMAPEYAIYGLFSIKSDIFSFGVLILEIVSGRKNRMISRENEDANLIAQAWILWKEKKALDFIDSCMENSYVELEALRCIHIGLLCVQQNPEDRPNMSNVVMMLGSEVALPQPKEPSFLTETSLLQAVDSSSYQQCISTNEISVTVLEAR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1169 831 CDD PAN_AP_plant 357 440 - -
Ahy18g1169 831 CDD B_lectin 34 158 IPR001480 -
Ahy18g1169 831 CDD STKc_IRAK 517 785 - -
Ahy18g1169 831 Pfam S-locus glycoprotein domain 216 329 IPR000858 GO:0048544
Ahy18g1169 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 189 IPR036426 -
Ahy18g1169 831 SMART blect_4 34 158 IPR001480 -
Ahy18g1169 831 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 16 829 - -
Ahy18g1169 831 ProSiteProfiles Protein kinase domain profile. 511 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1169 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Ahy18g1169 831 SMART serkin_6 511 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1169 831 Pfam Protein tyrosine and serine/threonine kinase 513 784 IPR001245 GO:0004672|GO:0006468
Ahy18g1169 831 Pfam PAN-like domain 361 425 IPR003609 -
Ahy18g1169 831 ProSiteProfiles PAN/Apple domain profile. 349 441 IPR003609 -
Ahy18g1169 831 Pfam Domain of unknown function (DUF3403) 788 831 IPR021820 GO:0004674
Ahy18g1169 831 SMART ntp_6 360 440 IPR003609 -
Ahy18g1169 831 Gene3D - 22 155 IPR036426 -
Ahy18g1169 831 Gene3D Phosphorylase Kinase; domain 1 476 588 - -
Ahy18g1169 831 Pfam D-mannose binding lectin 76 184 IPR001480 -
Ahy18g1169 831 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Ahy18g1169 831 Gene3D Transferase(Phosphotransferase) domain 1 589 794 - -
Ahy18g1169 831 Gene3D Hepatocyte Growth Factor 357 432 - -
Ahy18g1169 831 PIRSF SRK 1 831 IPR024171 GO:0004674
Ahy18g1169 831 PANTHER - 16 829 - -
Ahy18g1169 831 SUPERFAMILY Protein kinase-like (PK-like) 491 785 IPR011009 -
Ahy18g1169 831 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1169 Ahy-Chr18 18958900 18963801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1169 453 813 Receptor kinase-like Gene Family AT4G23190 50.136 5.78e-118 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1169 PK_Tyr_Ser-Thr 9.80E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1169 - - qsu:112016032 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1169 18 18958900 18963801 Ahy8g1866 8 37402888 37407843 hybridization