Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1154 ATGGAAAATTTTCTTATTATTTTTCTTGTTCTTGTTTCCTACACCTACATGTTTGTGGAAGCTTCTTCCTCTAATTCTTCATCTTCTGGGTTAAATAAAAATGATAGCACCACCATATGTGACCAATACAGTAGAGTGTGTGGACCAAACGGGAACTGCGATGAGGCAAAAACTTGTGTTTGCTTGGATGGTTTCACTCCTAAGTCCCCAACTGATTATGCTTATTACTTGAACTTTACACAGGGATGTGTGAGAAACAAACCTTTGAATTGTAGCACTGATGTGTTTGTTAGATATTCTTCTCTTAAAGAACCAAGTGGTGGTTATTCTCTGTCCAACCAACAGGATTGCATGGGAAAATGCAAGAGCAACTGTTCTTGTATGGCGTATAGCGTAATTTTGGGTGGATGCAAATTGTGGAATGGTGATTTGTTTGATGTTAGGTTGGTCAAGCAAGGTGGACAAGATCTTTATATTCGAATGGCAGTTTCAGAGGAACAAGAGAAGTCAGGAGGGAGAAAACATGGACGAAAGGAGGGAGCGGTGGTTGGAATAGTTGTCGGGAGCATTATTGTGATTTTCATGATAATCATTGCTTCATGGTACATGCTTAGGAAAAAAACAGCATCAAAAGCATTGGAACATTTAAGGATTGATGAGCTTGTTACTCATCACACCAATGTACAAAAGGAAGATATGGGGCTTCCATTATTTGATCTATCAACAATAGCAATGGCCACTAATAATTTCTCCCCCAACAATAAACTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGTATATTAGAAGATGGACAGCAAATTGCTGTCAAGAGGCTTTCAAGTAGTTCTGGCCAGGGTTTAAATGAATTCAAAACCGAAGTAAAGCTAATAGCTAGACTTCAACACCGTAATCTTGTAAAGCTTTTCGGATGTTGCATTCAAGAAGAGGAGAAATTACTAATATACGAATACATGCCTAATAAAAGCTTGGACTATTTTATTTTTGATCAAGAACGAAGGAGTACTTTAGATTGGTCCAAGCGCTTTAACATTATTAGCGGAATTGCTAAAGGCTTATTGTATCTTCAACAAGATTCAAGGTTAAGGATTATACATAGAGATCTTAAAACAAGTAATATTTTATTAGACACCAAGATGGAACCCAAAATATCAGATTTTGGTCTAGCTAGAAGTTTTGGAGGCGATCAAAGTAAAGCAAATACAAGGAGAATCGTCGGAACTTTCGGATACATGGCTCCAGAATACGCTGTTAATGGACTGTTTTCGATAAAATCTGACGTCTTTAGCTTTGGCATTTTATTACTTGAGATAGTATCTGGAAAGAGAAATAGAAGATTATTTTATGCAAGTGACAATGATGAAAGCTTGTATGAAAACGCGTGGGATTTATGGAAGCAAGGAAGGTCACTGGAGTTGGTGGATGAATGCCTCAAAGATTCATGGAATTTGAGTGAAGTACAACGTTGTATTCACATTGGCCTCCTATGTGCACAGCAATATCCACATGATAGGCCAACAATGTCTTCTGTGGTTTTAATGTTGGGAAGCGAAGTTGATTTGCCTCAACCCAAAGCTCCTACATTTATCTTTTGTGAACCTTTTGATGGTTCCAGTTCCAGTACTTGTAAAAACGAATTAAGCATTACAGAGATGGAAGCTCGGTAA 1689 0.3789 MENFLIIFLVLVSYTYMFVEASSSNSSSSGLNKNDSTTICDQYSRVCGPNGNCDEAKTCVCLDGFTPKSPTDYAYYLNFTQGCVRNKPLNCSTDVFVRYSSLKEPSGGYSLSNQQDCMGKCKSNCSCMAYSVILGGCKLWNGDLFDVRLVKQGGQDLYIRMAVSEEQEKSGGRKHGRKEGAVVGIVVGSIIVIFMIIIASWYMLRKKTASKALEHLRIDELVTHHTNVQKEDMGLPLFDLSTIAMATNNFSPNNKLGEGGFGPVYKGILEDGQQIAVKRLSSSSGQGLNEFKTEVKLIARLQHRNLVKLFGCCIQEEEKLLIYEYMPNKSLDYFIFDQERRSTLDWSKRFNIISGIAKGLLYLQQDSRLRIIHRDLKTSNILLDTKMEPKISDFGLARSFGGDQSKANTRRIVGTFGYMAPEYAVNGLFSIKSDVFSFGILLLEIVSGKRNRRLFYASDNDESLYENAWDLWKQGRSLELVDECLKDSWNLSEVQRCIHIGLLCAQQYPHDRPTMSSVVLMLGSEVDLPQPKAPTFIFCEPFDGSSSSTCKNELSITEMEAR* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1154 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Ahy18g1154 562 ProSiteProfiles Protein kinase domain profile. 250 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1154 562 SMART ntp_6 91 161 IPR003609 -
Ahy18g1154 562 CDD STKc_IRAK 256 522 - -
Ahy18g1154 562 SUPERFAMILY Protein kinase-like (PK-like) 233 535 IPR011009 -
Ahy18g1154 562 SMART serkin_6 250 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1154 562 Gene3D Transferase(Phosphotransferase) domain 1 326 530 - -
Ahy18g1154 562 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 555 - -
Ahy18g1154 562 Gene3D Phosphorylase Kinase; domain 1 209 325 - -
Ahy18g1154 562 Pfam S-locus glycoprotein domain 32 69 IPR000858 GO:0048544
Ahy18g1154 562 ProSiteProfiles PAN/Apple domain profile. 91 162 IPR003609 -
Ahy18g1154 562 CDD PAN_AP_plant 88 162 - -
Ahy18g1154 562 Pfam PAN-like domain 91 147 IPR003609 -
Ahy18g1154 562 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 25 555 - -
Ahy18g1154 562 Pfam Protein tyrosine and serine/threonine kinase 253 519 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1154 Ahy-Chr18 18248888 18251485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1154 182 536 Receptor kinase-like Gene Family AT4G23230 53.652 2.78e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g1154 PK_Tyr_Ser-Thr 1.90E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1154 - - aip:107610641 791.186